Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43374

Metabolite ID
P43374
Deionized mass
274.1913 Da
Average m/z
549.3875
Average RT
22.0072
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
67
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

67 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G137600 hypothetical protein NA 4Chr16:29468438–29472890 (-)1.384e-15
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)5.503e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)5.116e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.667e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 2Chr08:11525692–11536927 (+)4.641e-13
Glyma.14G172600 hypothetical protein AT1G34580:AT1G34580:Major facilitator superfamily protein 2Chr14:42702411–42715516 (+)6.756e-11
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 2Chr14:43637893–43642553 (+)3.483e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)3.917e-12
Glyma.16G135000 hypothetical protein AT3G50910:AT3G50910:netrin receptor DCC 2Chr16:29248080–29253429 (-)9.498e-11
Glyma.16G137000 hypothetical protein NA 2Chr16:29418205–29421765 (-)2.874e-12
Glyma.16G137100 hypothetical protein NA 2Chr16:29421091–29421534 (+)2.874e-12
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)3.828e-17
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.241e-12
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)4.601e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)3.332e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)2.993e-11
Glyma.03G145900 hypothetical protein AT5G06700:AT5G06700:trichome birefringence-like protein (DUF828) 1Chr03:36127816–36131230 (-)7.062e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.03e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.705e-13
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)2.699e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.667e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.667e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.667e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.667e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.322e-11
Glyma.08G303300 hypothetical protein NA 1Chr08:42134782–42139026 (+)1.735e-11
Glyma.08G303400 hypothetical protein NA 1Chr08:42139097–42147365 (+)1.735e-11
Glyma.08G338200 hypothetical protein NA 1Chr08:45509289–45511145 (+)2.649e-12
Glyma.08G338600 hypothetical protein NA 1Chr08:45522321–45523727 (-)2.649e-12
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)2.649e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)6.602e-13
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)7.297e-12
Glyma.14G172900 hypothetical protein NA 1Chr14:42766407–42769069 (+)6.756e-11
Glyma.14G176600 hypothetical protein NA 1Chr14:43565478–43570243 (+)3.847e-11
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)6.807e-14
Glyma.14G178600 hypothetical protein NA 1Chr14:43963455–43970275 (+)3.076e-13
Glyma.14G178700 hypothetical protein NA 1Chr14:43978407–43980052 (+)3.076e-13
Glyma.14G178800 hypothetical protein AT1G28210:ATJ1:DNAJ heat shock family protein 1Chr14:43987725–44003499 (-)3.076e-13
Glyma.14G179000 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 1Chr14:44030814–44034325 (+)1.537e-12
Glyma.14G179200 hypothetical protein AT4G24380:AT4G24380:dihydrofolate reductase 1Chr14:44060802–44063722 (+)1.537e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)4.182e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.168e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.168e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.168e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)5.507e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.522e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.918e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.044e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.465e-12
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)1.468e-15
Glyma.16G139400 hypothetical protein AT3G50870:MNP:GATA type zinc finger transcription factor family protein 1Chr16:29672011–29674023 (+)5.884e-12
Glyma.16G140700 hypothetical protein NA 1Chr16:29846716–29852078 (-)5.918e-11
Glyma.16G140800 hypothetical protein AT3G50690:AT3G50690:Leucine-rich repeat (LRR) family protein 1Chr16:29854784–29858843 (-)1.111e-11
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 1Chr16:29937044–29939337 (+)3.747e-11
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 1Chr16:29970884–29978773 (-)3.747e-11
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 1Chr16:30388030–30390647 (-)8.113e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)6.66e-17
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)1.659e-14
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)4.544e-12
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)1.398e-15
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 1Chr16:30604586–30608656 (+)2.476e-12
Glyma.16G145400 hypothetical protein AT3G12090:TET6:tetraspanin6 1Chr16:30624348–30627475 (+)5.263e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.828e-17
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.241e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.561e-17
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)8.326e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.46e-13