Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43074

Metabolite ID
P43074
Deionized mass
553.7386 Da
Average m/z
554.7460
Average RT
21.8055
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)1.422e-12
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)3.931e-13
Glyma.08G147300 hypothetical protein NA 2Chr08:11238871–11242682 (+)3.471e-13
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 2Chr09:41217358–41221592 (-)1.489e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)8.775e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.777e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)4.236e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)1.546e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.46e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.459e-11
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 1Chr08:9054060–9063297 (+)4.608e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)1.422e-12
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 1Chr08:9169843–9172229 (-)4.769e-11
Glyma.08G146400 hypothetical protein AT5G09830:AT5G09830:BolA-like family protein 1Chr08:11139657–11142335 (-)3.488e-12
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)2.513e-11
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)1.179e-12
Glyma.12G095500 hypothetical protein AT3G44150:AT3G44150:Expp1 protein 1Chr12:8023570–8027770 (-)3.836e-12
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)7.252e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.116e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.946e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.116e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.116e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.348e-13
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.462e-12