Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P42575

Metabolite ID
P42575
Deionized mass
748.3842 Da
Average m/z
749.3908
Average RT
21.5045
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.77e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.998e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)2.803e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)2.803e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)2.803e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.468e-14
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)7.801e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)9.398e-11
Glyma.04G062500 hypothetical protein NA 1Chr04:5158262–5163060 (-)6.775e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.77e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.77e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.998e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.998e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.998e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.998e-12
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)3.554e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)1.675e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)2.803e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)2.803e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)2.803e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)2.803e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)2.803e-11
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 1Chr14:46291986–46298337 (+)5.989e-13
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)5.989e-13
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)6.381e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.213e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.646e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.737e-11