Overview Annotation GWAS Evidence Associated genes

P41752

Metabolite ID
P41752
Deionized mass
254.1576 Da
Average m/z
255.1664
Average RT
20.9247
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
40
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

40 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.131e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.316e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)6.66e-11
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)5.137e-11
Glyma.14G171400 hypothetical protein NA 2Chr14:42398866–42404627 (+)3.278e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)5.265e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.131e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)7.558e-13
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)2.49e-11
Glyma.19G128200 hypothetical protein NA 2Chr19:38739769–38743404 (+)4.723e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.266e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.022e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.526e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)4.217e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)9.958e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.765e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)3.139e-13
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)3.139e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.166e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.316e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.316e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.89e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.771e-14
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)2.237e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.657e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.599e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)6.677e-12
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)3.278e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)8.053e-12
Glyma.16G020900 hypothetical protein NA 1Chr16:1932165–1935289 (-)3.427e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)6.66e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)6.66e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)6.66e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)6.66e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)6.37e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)1.826e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.691e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)5.136e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)5.137e-11
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)3.46e-13