Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P41219

Metabolite ID
P41219
Deionized mass
205.5188 Da
Average m/z
206.5254
Average RT
20.6171
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
98
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

98 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)9.865e-12
Glyma.13G224800 hypothetical protein NA 3Chr13:33748627–33756494 (-)5.771e-11
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.454e-12
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)1.099e-15
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)3.909e-18
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)2.981e-13
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 2Chr08:9169843–9172229 (-)4.581e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.552e-11
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)1.11e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)3.219e-11
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)1.288e-11
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)1.288e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)2.563e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)3.408e-14
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.37e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.697e-14
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.048e-14
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)1.229e-13
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)1.229e-13
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)1.229e-13
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)1.229e-13
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)1.229e-13
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)1.229e-13
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)1.229e-13
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.454e-12
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)3.443e-11
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)4.761e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)6.895e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.063e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.288e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.295e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.59e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.869e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.869e-12
Glyma.06G301000 hypothetical protein NA 1Chr06:49001317–49005605 (+)1.399e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.917e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)2.938e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)7.283e-12
Glyma.08G104600 hypothetical protein AT1G27930:AT1G27930:glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 1Chr08:8045602–8047222 (-)7.662e-11
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 1Chr08:8296196–8307328 (-)8.355e-11
Glyma.08G108400 hypothetical protein NA 1Chr08:8326311–8330206 (+)8.355e-11
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)1.187e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)1.187e-11
Glyma.08G110200 hypothetical protein NA 1Chr08:8471393–8473156 (+)6.696e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)2.683e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)4.073e-11
Glyma.08G116400 hypothetical protein NA 1Chr08:8947598–8949573 (-)7.985e-12
Glyma.08G116700 hypothetical protein NA 1Chr08:8997512–9003565 (+)2.903e-11
Glyma.08G116800 hypothetical protein AT1G29240:AT1G29240:transcription initiation factor TFIID subunit, putative (DUF688) 1Chr08:9006479–9010442 (-)8.038e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)1.096e-14
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)3.909e-18
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)2.354e-14
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)8.607e-15
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.34e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.66e-11
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)7.479e-11
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)1.581e-11
Glyma.13G224300 hypothetical protein NA 1Chr13:33703380–33715996 (-)6.691e-11
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)5.771e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.268e-14
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr14:16751592–16763348 (-)9.57e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.552e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.997e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)8.79e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)9.442e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.66e-13
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)1.647e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)3.452e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)5.693e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)5.335e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)8.994e-14
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)9.687e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.763e-14
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.281e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.051e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)3.745e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)7.532e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)7.532e-12
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)1.534e-11
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)1.534e-11
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)1.534e-11
Glyma.18G265500 hypothetical protein AT5G39250:AT5G39250:F-box family protein 1Chr18:55019514–55022070 (-)1.927e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)4.941e-13
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)2.044e-11
Glyma.19G245800 hypothetical protein AT3G04690:ANX1:Malectin/receptor-like protein kinase family protein 1Chr19:49263978–49267290 (+)5.728e-11
Glyma.20G058300 hypothetical protein AT2G31340:emb1381:embryo defective 1381 1Chr20:17536634–17556845 (-)5.639e-11
Glyma.20G058500 hypothetical protein AT5G35690:AT5G35690:zinc metalloproteinase-like protein 1Chr20:17704024–17732890 (-)5.639e-11
Glyma.20G058600 hypothetical protein NA 1Chr20:17714996–17723526 (-)5.639e-11
Glyma.20G058900 hypothetical protein NA 1Chr20:17856607–17870302 (-)5.639e-11
Glyma.20G059000 hypothetical protein AT4G12650:AT4G12650:Endomembrane protein 70 protein family 1Chr20:17864634–17867799 (+)5.639e-11
Glyma.20G060000 hypothetical protein AT2G04360:AT2G04360:uncharacterized protein 1Chr20:18396137–18402016 (+)5.639e-11
Glyma.20G061600 hypothetical protein AT4G12680:AT4G12680:uncharacterized protein 1Chr20:19167408–19171993 (-)5.639e-11
Glyma.20G061900 hypothetical protein NA 1Chr20:19276438–19277943 (-)5.639e-11
Glyma.20G062200 hypothetical protein NA 1Chr20:19517781–19521218 (-)5.639e-11
Glyma.20G064100 hypothetical protein NA 1Chr20:21538873–21551968 (+)5.639e-11
Glyma.20G065200 hypothetical protein AT4G14965:MAPR4:membrane-associated progesterone binding protein 4 1Chr20:23032161–23039465 (+)5.639e-11
Glyma.20G065700 hypothetical protein NA 1Chr20:23270247–23273003 (+)5.64e-11
Glyma.20G066100 NRP-A AT5G42050:AT5G42050:DCD (Development and Cell Death) domain protein 1Chr20:23415656–23418864 (-)5.639e-11