Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P41112

Metabolite ID
P41112
Deionized mass
430.6947 Da
Average m/z
431.7014
Average RT
20.5646
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)2.017e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.03e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)5.346e-14
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.78e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.209e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.209e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)4.192e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)2.76e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)8.339e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)2.712e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.78e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.781e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.78e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.78e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.369e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.075e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.075e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.74e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.74e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)6.825e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)2.633e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)5.823e-16
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.602e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.602e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.209e-11
Glyma.15G233600 hypothetical protein NA 1Chr15:43971478–43972713 (+)1.699e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)4.192e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)4.722e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)2.017e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)2.017e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)2.017e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)2.017e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)3.258e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.408e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.198e-13
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 1Chr16:29937044–29939337 (+)2.237e-11
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 1Chr16:29970884–29978773 (-)2.237e-11
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 1Chr16:30388030–30390647 (-)6.698e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)6.361e-14
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)5.076e-14
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)6.177e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.218e-16
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)2.509e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.218e-16
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)7.705e-15
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.104e-11
Glyma.18G266200 hypothetical protein NA 1Chr18:55065716–55066843 (-)4.49e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)1.321e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)5.205e-13