Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P40966

Metabolite ID
P40966
Deionized mass
394.2693 Da
Average m/z
395.2754
Average RT
20.4705
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.881e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)3.775e-14
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)2.318e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 2Chr14:1009519–1014238 (+)9.881e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.817e-18
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)8.079e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)7.521e-16
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)1.853e-11
Glyma.04G112500 hypothetical protein AT5G56170:LLG1:LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 1Chr04:12607567–12609981 (+)4.037e-11
Glyma.04G112600 hypothetical protein AT5G56180:ARP8:actin-related protein 8 1Chr04:12610633–12620549 (-)4.037e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)3.764e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.881e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.881e-13
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.693e-11
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1Chr09:4583416–4589291 (-)3.882e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.851e-17
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.249e-25
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.734e-22
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)4.66e-15
Glyma.11G118200 hypothetical protein NA 1Chr11:8979431–8983783 (+)8.892e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.926e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.926e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.643e-11
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1Chr14:3343611–3346483 (+)5.355e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)3.958e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)8.158e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.653e-15
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)5.492e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)5.492e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)5.616e-15
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)5.618e-15
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)5.618e-15
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.926e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)6.333e-12
Glyma.16G134500 hypothetical protein NA 1Chr16:29128092–29130458 (-)3.618e-11
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)8.394e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)4.471e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.269e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.269e-14
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.488e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)7.185e-11