Overview Annotation GWAS Evidence Associated genes

P40940

Metabolite ID
P40940
Deionized mass
1010.5101 Da
Average m/z
1011.5136
Average RT
20.4536
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G064500 hypothetical protein NA 3Chr04:5367346–5372857 (+)1.075e-13
Glyma.04G064300 Tyrosyl-DNA phosphodiesterase 1 AT5G15170:TDP1:tyrosyl-DNA phosphodiesterase-like protein 1Chr04:5351566–5357225 (+)8.106e-14
Glyma.08G183500 SWEET24 sugar efflux transporter SWEET24 AT5G13170:SAG29:senescence-associated 29 1Chr08:14724384–14726579 (+)1.6e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)7.719e-11