Overview Annotation GWAS Evidence Associated genes

P40186

Metabolite ID
P40186
Deionized mass
450.2230 Da
Average m/z
451.2299
Average RT
19.9937
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
136
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

136 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.728e-12
Glyma.08G147300 hypothetical protein NA 3Chr08:11238871–11242682 (+)4.464e-13
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 3Chr08:11253074–11256505 (+)1.494e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)2.788e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.181e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.181e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 2Chr14:6037810–6041899 (+)3.073e-17
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)6.892e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.728e-12
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)1.176e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.139e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)4.284e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)5.324e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)5.324e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)5.324e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)5.324e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)5.324e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)5.324e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)5.324e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.713e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.713e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.28e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.869e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)2.445e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.372e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)9.806e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)7.033e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)5.1e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.646e-12
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)2.884e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.408e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)5.364e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.035e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.089e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.089e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.206e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.155e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.155e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.155e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.607e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.743e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.073e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.441e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.441e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.441e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.673e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.673e-14
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)3.26e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)8.246e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)3.73e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)2e-11
Glyma.07G070300 hypothetical protein AT2G45910:AT2G45910:U-box domain-containing protein kinase family protein 1Chr07:6364435–6372387 (-)9.529e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)9.211e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.482e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.183e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)3.183e-11
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)1.26e-14
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)8.207e-13
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)5.508e-14
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.428e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.428e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)3.965e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)3.965e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)8.01e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)7.273e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)6.969e-11
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)7.733e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)7.351e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.019e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.314e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.651e-15
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)3.02e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)3.02e-11
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)8.723e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)3.392e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)7.846e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.329e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.788e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.182e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.182e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.207e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)1.033e-12
Glyma.13G183400 hypothetical protein NA 1Chr13:29666942–29670201 (+)5.744e-11
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)4.28e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)3.019e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)7.545e-13
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)7.545e-13
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)7.545e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.455e-14
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)4.137e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.888e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.158e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.156e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.114e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.765e-14
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)4.04e-15
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)3.073e-17
Glyma.14G071900 hypothetical protein AT1G19650:AT1G19650:Sec14p-like phosphatidylinositol transfer family protein__AT1G75370:AT1G75370:Sec14p-like phosphati… 1Chr14:6043655–6049030 (+)2.191e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)7.401e-14
Glyma.14G072600 hypothetical protein NA 1Chr14:6097297–6102480 (-)9.897e-11
Glyma.14G073100 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr14:6138618–6142249 (-)2.599e-11
Glyma.14G073200 hypothetical protein NA 1Chr14:6151199–6153371 (-)2.599e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.337e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)5.937e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)5.937e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)5.937e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.627e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.721e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.627e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.627e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.525e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)6.907e-13
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)3.52e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)4.607e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)4.365e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.309e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)8.12e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.893e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)6.687e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)6.905e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.905e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.281e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.281e-12
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)1.286e-11
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)3.285e-11
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)3.285e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)1.475e-12
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)5.014e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)5.014e-11
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)1.784e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.569e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)4.251e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.511e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.511e-13
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.49e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.387e-12