Overview Annotation GWAS Evidence Associated genes

P40162

Metabolite ID
P40162
Deionized mass
486.2437 Da
Average m/z
487.2501
Average RT
19.9720
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G191400 Probable inactive linolenate hydroperoxide lyase AT4G15440:HPL1:hydroperoxide lyase 1 4Chr12:35295823–35301648 (+)2.74e-12
Glyma.02G121500 hypothetical protein NA 2Chr02:12065640–12082937 (+)6.721e-11
Glyma.12G191200 hypothetical protein AT3G21610:AT3G21610:Acid phosphatase/vanadium-dependent haloperoxidase-related protein 2Chr12:35283880–35288771 (+)2.741e-12
Glyma.02G122100 hypothetical protein NA 1Chr02:12134374–12137612 (+)6.721e-11
Glyma.12G190500 hypothetical protein AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein 1Chr12:35206636–35216806 (-)7.501e-12
Glyma.12G191100 hypothetical protein NA 1Chr12:35277292–35281612 (+)7.7e-12
Glyma.12G192100 hypothetical protein NA 1Chr12:35369755–35373481 (-)1.433e-17