Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P40141

Metabolite ID
P40141
Deionized mass
982.5065 Da
Average m/z
983.5161
Average RT
19.9647
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G170900 hypothetical protein AT1G78060:AT1G78060:Glycosyl hydrolase family protein 3Chr14:42298358–42306613 (-)1.47e-11
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 2Chr03:44673965–44702804 (-)7.52e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.86e-12
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)8.546e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.053e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.422e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)8.423e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)8.422e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.685e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)3.151e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.294e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.68e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.652e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.652e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)4.105e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)4.105e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.465e-14
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.515e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.515e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.515e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.515e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.982e-11
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)6.755e-12
Glyma.14G171100 hypothetical protein NA 1Chr14:42357087–42363791 (-)1.47e-11
Glyma.15G216700 hypothetical protein NA 1Chr15:35649229–35652466 (-)4.393e-11
Glyma.15G216900 hypothetical protein NA 1Chr15:35680524–35686654 (-)4.393e-11
Glyma.15G217100 hypothetical protein NA 1Chr15:35830853–35832075 (-)4.393e-11
Glyma.16G057500 hypothetical protein NA 1Chr16:5631176–5634867 (-)9.146e-14
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)7.397e-13
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)5.666e-11
Glyma.16G058500 hypothetical protein NA 1Chr16:5729463–5733348 (-)1.196e-11
Glyma.16G058600 hypothetical protein NA 1Chr16:5750833–5751989 (-)1.196e-11
Glyma.16G063600 hypothetical protein NA 1Chr16:6255512–6260421 (+)2.246e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)9.664e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)9.664e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.22e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)2.768e-12
Glyma.19G027700 hypothetical protein AT5G15440:EDL1:EID1-like 1 1Chr19:3471299–3475645 (+)3.59e-11
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 1Chr19:3511914–3519141 (+)1.75e-11
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)9.723e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.078e-13
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)5.431e-13
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 1Chr20:35134138–35152085 (-)8.164e-11