Overview Annotation GWAS Evidence Associated genes

P39796

Metabolite ID
P39796
Deionized mass
142.0257 Da
Average m/z
143.0329
Average RT
19.7522
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G109100 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 9Chr18:12576818–12661446 (+)3.899e-12
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)7.125e-11
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 4Chr18:12220182–12260477 (+)4.179e-11
Glyma.18G108400 hypothetical protein NA 3Chr18:12370997–12390275 (-)3.401e-11
Glyma.18G109000 hypothetical protein AT4G17310:AT4G17310:uncharacterized protein 2Chr18:12545880–12555395 (+)4.179e-11
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)7.125e-11
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)7.125e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)7.125e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.776e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.198e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.958e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)7.648e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)7.648e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)7.648e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.905e-13
Glyma.18G107700 hypothetical protein NA 1Chr18:12207661–12208644 (-)4.179e-11
Glyma.18G108100 hypothetical protein AT1G04920:SPS3F:sucrose phosphate synthase 3F 1Chr18:12308018–12314522 (-)4.179e-11
Glyma.18G108200 hypothetical protein NA 1Chr18:12349093–12352900 (+)4.179e-11
Glyma.18G109400 hypothetical protein NA 1Chr18:12648799–12650806 (+)4.179e-11
Glyma.18G109800 hypothetical protein AT2G38020:VCL1:vacuoleless1 (VCL1) 1Chr18:12757393–12765830 (+)4.179e-11