P39456
Metabolite ID
P39456
Deionized mass
616.2863 Da
Average m/z
617.2930
Average RT
19.5585
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
34
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
34 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G111500 | hypothetical protein | AT4G35500:AT4G35500:Protein kinase superfamily protein | 4 | Chr16:24626024–24635513 (+) | 1.115e-13 | |
| Glyma.16G143700 | hypothetical protein | AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 | 4 | Chr16:30388030–30390647 (-) | 2.1e-13 | |
| Glyma.16G142300 | hypothetical protein | AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein | 2 | Chr16:30086178–30091466 (-) | 4.606e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 2 | Chr16:30578388–30581421 (-) | 1.102e-16 | |
| Glyma.16G146700 | hypothetical protein | NA | 2 | Chr16:30755899–30759360 (-) | 3.767e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 5.305e-14 | |
| Glyma.03G145700 | hypothetical protein | AT3G58030:AT3G58030:RING/U-box superfamily protein | 1 | Chr03:36109689–36112241 (+) | 2.783e-11 | |
| Glyma.03G147400 | hypothetical protein | NA | 1 | Chr03:36293698–36295294 (+) | 3.478e-13 | |
| Glyma.04G116900 | hypothetical protein | NA | 1 | Chr04:13696275–13700803 (+) | 2.61e-12 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 8.243e-12 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 3.451e-11 | |
| Glyma.08G303300 | hypothetical protein | NA | 1 | Chr08:42134782–42139026 (+) | 2.492e-11 | |
| Glyma.08G303400 | hypothetical protein | NA | 1 | Chr08:42139097–42147365 (+) | 2.492e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 3.322e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 1 | Chr14:8654730–8655892 (-) | 2.744e-11 | |
| Glyma.16G106300 | hypothetical protein | AT5G23900:AT5G23900:Ribosomal protein L13e family protein | 1 | Chr16:21495147–21497932 (+) | 6.67e-12 | |
| Glyma.16G111100 | hypothetical protein | NA | 1 | Chr16:24438458–24444801 (+) | 1.115e-13 | |
| Glyma.16G111400 | hypothetical protein | AT4G35510:AT4G35510:PHD finger-like protein | 1 | Chr16:24546422–24549336 (+) | 9.197e-12 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 8.087e-11 | |
| Glyma.16G134900 | hypothetical protein | AT5G66470:AT5G66470:GTP-binding protein Era-like protein | 1 | Chr16:29214758–29219443 (-) | 9.447e-12 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 8.155e-11 | |
| Glyma.16G138800 | hypothetical protein | NA | 1 | Chr16:29609432–29615000 (+) | 4.091e-12 | |
| Glyma.16G141300 | hypothetical protein | AT4G36710:HAM4:GRAS family transcription factor | 1 | Chr16:29937044–29939337 (+) | 5.929e-13 | |
| Glyma.16G141600 | hypothetical protein | AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein | 1 | Chr16:29970884–29978773 (-) | 5.929e-13 | |
| Glyma.16G142800 | hypothetical protein | AT2G23760:BLH4:BEL1-like homeodomain 4 | 1 | Chr16:30201467–30210093 (+) | 9.894e-13 | |
| Glyma.16G143100 | hypothetical protein | AT2G23740:SUVR5:histone-lysine N-methyltransferase SUVR5 | 1 | Chr16:30245352–30261255 (-) | 9.894e-13 | |
| Glyma.16G143200 | hypothetical protein | AT5G66600:AT5G66600:electron transporter, putative (Protein of unknown function, DUF547) | 1 | Chr16:30273151–30278680 (+) | 9.894e-13 | |
| Glyma.16G143600 | hypothetical protein | AT3G50820:PSBO2:photosystem II subunit O-2 | 1 | Chr16:30379885–30382483 (-) | 9.894e-13 | |
| Glyma.16G144100 | hypothetical protein | NA | 1 | Chr16:30432951–30434052 (-) | 3.821e-15 | |
| Glyma.16G144700 | hypothetical protein | AT5G66960:AT5G66960:Prolyl oligopeptidase family protein | 1 | Chr16:30514629–30519598 (+) | 8.136e-15 | |
| Glyma.16G145500 | hypothetical protein | AT2G39200:MLO12:Seven transmembrane MLO family protein | 1 | Chr16:30630177–30636253 (+) | 5.62e-11 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 1.102e-16 | |
| Glyma.16G146300 | hypothetical protein | NA | 1 | Chr16:30714315–30716624 (+) | 3.767e-13 | |
| Glyma.16G147000 | hypothetical protein | NA | 1 | Chr16:30773803–30777822 (-) | 6.057e-16 |