Overview Annotation GWAS Evidence Associated genes

P39322

Metabolite ID
P39322
Deionized mass
622.3307 Da
Average m/z
623.3383
Average RT
19.4760
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G140600 hypothetical protein NA 2Chr16:29836830–29839178 (+)6.263e-14
Glyma.17G215200 hypothetical protein NA 2Chr17:36125880–36142936 (+)4.756e-11
Glyma.03G085900 hypothetical protein AT3G07310:AT3G07310:phosphoserine aminotransferase, putative (DUF760) 1Chr03:25280967–25285887 (-)9.475e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.787e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.211e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)9.824e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)3.252e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.059e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.455e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.059e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.059e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)4.825e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.521e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)1.608e-12
Glyma.17G212100 hypothetical protein NA 1Chr17:35010757–35014587 (+)4.756e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)4.756e-11
Glyma.17G213300 hypothetical protein NA 1Chr17:35589559–35592664 (+)4.756e-11
Glyma.17G213600 hypothetical protein AT4G32060:AT4G32060:calcium-binding EF hand family protein 1Chr17:35740625–35746554 (-)4.756e-11
Glyma.17G213700 hypothetical protein AT5G11090:AT5G11090:serine-rich protein-like protein 1Chr17:35767502–35768989 (-)4.756e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)4.756e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.756e-11
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)1.014e-11