P39032
Metabolite ID
P39032
Deionized mass
556.1404 Da
Average m/z
557.1479
Average RT
19.3306
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
91
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
91 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 4.974e-11 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 2.329e-13 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 6.346e-13 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 6.346e-13 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 4.841e-15 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 2 | Chr16:26324650–26336836 (+) | 2.311e-11 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 4.974e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 5.949e-14 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 1.384e-12 | |
| Glyma.04G104400 | hypothetical protein | NA | 1 | Chr04:9885009–9889282 (+) | 1.015e-11 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 1.156e-14 | |
| Glyma.05G147700 | hypothetical protein | NA | 1 | Chr05:34199925–34202541 (+) | 4.323e-11 | |
| Glyma.05G154000 | hypothetical protein | NA | 1 | Chr05:34732843–34735376 (-) | 1.428e-12 | |
| Glyma.05G224500 | hypothetical protein | NA | 1 | Chr05:40342583–40345336 (+) | 3.67e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 2.703e-11 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 5.203e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.372e-13 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 5.97e-14 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 5.719e-12 | |
| Glyma.06G073700 | hypothetical protein | AT2G25660:emb2410:embryo defective 2410 | 1 | Chr06:5670056–5689370 (-) | 4.882e-11 | |
| Glyma.06G074700 | hypothetical protein | AT2G25730:AT2G25730:zinc finger FYVE domain protein | 1 | Chr06:5758402–5786537 (-) | 4.882e-11 | |
| Glyma.06G275800 | hypothetical protein | AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta | 1 | Chr06:46677753–46682900 (-) | 5.69e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 5.67e-11 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 9.479e-11 | |
| Glyma.07G017600 | hypothetical protein | NA | 1 | Chr07:1415837–1422680 (+) | 2.316e-11 | |
| Glyma.07G075000 | hypothetical protein | AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein | 1 | Chr07:6821674–6829551 (-) | 2.408e-11 | |
| Glyma.07G075300 | hypothetical protein | NA | 1 | Chr07:6843882–6845602 (-) | 2.408e-11 | |
| Glyma.07G095400 | hypothetical protein | NA | 1 | Chr07:8914725–8920132 (+) | 5.717e-11 | |
| Glyma.08G114800 | hypothetical protein | AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein | 1 | Chr08:8792663–8798214 (-) | 4.157e-11 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 8.115e-12 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 4.188e-13 | |
| Glyma.09G060200 | hypothetical protein | AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr09:5571201–5579976 (-) | 4.18e-11 | |
| Glyma.09G060300 | hypothetical protein | AT5G57140:PAP28:purple acid phosphatase 28 | 1 | Chr09:5609003–5612943 (+) | 3.455e-11 | |
| Glyma.09G068800 | hypothetical protein | AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein | 1 | Chr09:6979166–6993110 (-) | 9.692e-11 | |
| Glyma.11G095100 | hypothetical protein | NA | 1 | Chr11:7212438–7214276 (-) | 3.889e-12 | |
| Glyma.11G109100 | hypothetical protein | NA | 1 | Chr11:8322727–8324868 (-) | 1.359e-14 | |
| Glyma.11G109400 | hypothetical protein | AT4G28510:PHB1:prohibitin 1 | 1 | Chr11:8340396–8344235 (-) | 8.177e-13 | |
| Glyma.11G109500 | hypothetical protein | NA | 1 | Chr11:8345676–8351718 (+) | 8.177e-13 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 9.915e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 9.916e-12 | |
| Glyma.12G203300 | hypothetical protein | AT4G03430:EMB2770:pre-mRNA splicing factor-like protein | 1 | Chr12:36371465–36377700 (-) | 9.144e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 5.413e-15 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 9.353e-12 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 9.353e-12 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 2.608e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 2.132e-12 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 2.132e-12 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 6.346e-13 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 3.267e-11 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 3.314e-11 | |
| Glyma.14G213400 | hypothetical protein | NA | 1 | Chr14:47844823–47847028 (+) | 4.78e-11 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 2.373e-12 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 8.034e-15 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 2.373e-12 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 2.373e-12 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.308e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.354e-12 | |
| Glyma.16G041800 | hypothetical protein | NA | 1 | Chr16:3914214–3917387 (-) | 8.557e-11 | |
| Glyma.16G077600 | hypothetical protein | AT3G18760:AT3G18760:Translation elongation factor EF1B/ribosomal protein S6 family protein | 1 | Chr16:7985004–7987315 (-) | 9.186e-11 | |
| Glyma.16G093700 | hypothetical protein | NA | 1 | Chr16:15100987–15107038 (+) | 1.118e-11 | |
| Glyma.16G093800 | hypothetical protein | NA | 1 | Chr16:15144247–15160454 (-) | 1.118e-11 | |
| Glyma.16G094200 | hypothetical protein | NA | 1 | Chr16:15770075–15772475 (-) | 1.118e-11 | |
| Glyma.16G094300 | hypothetical protein | AT5G44650:CEST:death domain associated protein | 1 | Chr16:15796268–15811033 (-) | 1.118e-11 | |
| Glyma.16G094500 | hypothetical protein | AT1G30825:DIS2:Arp2/3 complex, 34 kD subunit p34-Arc | 1 | Chr16:15914865–15930406 (-) | 1.118e-11 | |
| Glyma.16G095100 | hypothetical protein | AT1G32080:LrgB:uncharacterized protein | 1 | Chr16:16891012–16896814 (-) | 1.118e-11 | |
| Glyma.16G095200 | hypothetical protein | AT2G35530:bZIP16:basic region/leucine zipper transcription factor 16 | 1 | Chr16:16911412–16924907 (-) | 1.118e-11 | |
| Glyma.16G096000 | Site-2 protease | AT4G20310:AT4G20310:Peptidase M50 family protein | 1 | Chr16:17694666–17720668 (+) | 1.118e-11 | |
| Glyma.16G096600 | hypothetical protein | AT5G58140:PHOT2:phototropin 2 | 1 | Chr16:18621149–18647713 (-) | 1.118e-11 | |
| Glyma.16G096900 | hypothetical protein | AT1G68690:PERK9:Protein kinase superfamily protein | 1 | Chr16:18767931–18777350 (-) | 1.118e-11 | |
| Glyma.16G097800 | hypothetical protein | NA | 1 | Chr16:18963735–18965227 (-) | 7.848e-11 | |
| Glyma.16G098100 | hypothetical protein | AT2G24200:LAP1:Cytosol aminopeptidase family protein | 1 | Chr16:18973369–18985630 (+) | 7.848e-11 | |
| Glyma.16G098400 | hypothetical protein | NA | 1 | Chr16:18995593–18996330 (-) | 7.848e-11 | |
| Glyma.16G099100 | hypothetical protein | AT5G06350:AT5G06350:ARM repeat superfamily protein | 1 | Chr16:19072070–19086771 (+) | 7.848e-11 | |
| Glyma.16G105100 | hypothetical protein | NA | 1 | Chr16:21259552–21267517 (-) | 2.706e-12 | |
| Glyma.16G105300 | hypothetical protein | AT4G19120:ERD3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr16:21299154–21305321 (-) | 2.548e-13 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 6.005e-17 | |
| Glyma.16G112600 | hypothetical protein | NA | 1 | Chr16:25015407–25020098 (-) | 5.06e-12 | |
| Glyma.16G113000 | hypothetical protein | NA | 1 | Chr16:25112070–25116073 (+) | 3.035e-14 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 3.962e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 4.48e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 9.794e-12 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 8.929e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 6.358e-11 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 6.358e-11 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 5.544e-14 | |
| Glyma.18G259000 | hypothetical protein | NA | 1 | Chr18:54442402–54446789 (-) | 3.465e-11 | |
| Glyma.19G006900 | hypothetical protein | AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr19:686556–692466 (-) | 2.562e-11 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1123637–1130946 (+) | 9.141e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 1.905e-16 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 1.905e-16 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 1.33e-11 |