Overview Annotation GWAS Evidence Associated genes

P38531

Metabolite ID
P38531
Deionized mass
174.1029 Da
Average m/z
175.1103
Average RT
19.0624
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 2Chr01:50404781–50436297 (-)5.079e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)4.598e-12
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 2Chr09:6509441–6524102 (+)1.438e-12
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 1Chr01:50402188–50404181 (+)5.079e-11
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 1Chr01:50443699–50446896 (-)5.079e-11
Glyma.02G066600 hypothetical protein AT3G26710:CCB1:cofactor assembly of complex C 1Chr02:5906703–5909184 (-)8.536e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.391e-13
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)6.43e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)2.425e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.235e-11
Glyma.09G066300 hypothetical protein AT2G19400:AT2G19400:AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 1Chr09:6487197–6498214 (-)1.231e-11
Glyma.09G068500 PHD6 PHD finger protein GmPHD6 AT5G20510:AL5:alfin-like 5 1Chr09:6937814–6941687 (+)3.454e-12
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)7.32e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)9.66e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)9.66e-13
Glyma.20G129900 hypothetical protein NA 1Chr20:37091399–37092697 (-)5.305e-11