Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P38527

Metabolite ID
P38527
Deionized mass
848.4470 Da
Average m/z
849.4586
Average RT
19.0620
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G059200 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 4Chr07:5284646–5293001 (-)2.472e-12
Glyma.07G058900 hypothetical protein NA 3Chr07:5268461–5272348 (+)1.406e-12
Glyma.07G059300 hypothetical protein AT2G39780:RNS2:ribonuclease 2 3Chr07:5293201–5300088 (-)5.807e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)9.537e-13
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.335e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.043e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)2.299e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)8.46e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)6.334e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)3.22e-11
Glyma.03G142200 hypothetical protein AT3G47370:AT3G47370:Ribosomal protein S10p/S20e family protein 1Chr03:35800933–35802532 (+)4.488e-12
Glyma.03G145900 hypothetical protein AT5G06700:AT5G06700:trichome birefringence-like protein (DUF828) 1Chr03:36127816–36131230 (-)1.416e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.102e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.391e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)6.794e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)6.794e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)6.794e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.419e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.419e-13
Glyma.07G058600 hypothetical protein AT5G12230:MED19A:mediator of RNA polymerase II transcription subunit 19a-like protein 1Chr07:5240996–5247125 (-)6.756e-13
Glyma.07G058700 hypothetical protein AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein 1Chr07:5251199–5260710 (+)6.756e-13
Glyma.07G059100 hypothetical protein NA 1Chr07:5282519–5283075 (-)2.472e-12
Glyma.08G107700 RHG4 receptor-like kinase RHG4 NA 1Chr08:8284689–8288765 (+)1.716e-11
Glyma.08G107800 AK-HSDH aspartokinase-homoserine dehydrogenase AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 1Chr08:8296196–8307328 (-)1.911e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)3.174e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)3.174e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.783e-15
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)6.127e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.806e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)4.979e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.068e-11
Glyma.15G191500 hypothetical protein AT1G30800:AT1G30800:Fasciclin-like arabinogalactan family protein 1Chr15:20695259–20696664 (+)3.524e-11
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 1Chr15:33408140–33467420 (+)1.583e-12
Glyma.15G233600 hypothetical protein NA 1Chr15:43971478–43972713 (+)3.37e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)9.537e-13
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)9.537e-13
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)9.537e-13
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)9.537e-13
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)4.37e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.395e-13
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.335e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.335e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.509e-11
Glyma.16G157200 hypothetical protein AT1G71850:AT1G71850:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr16:31774664–31777363 (+)1.381e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)2.568e-11
Glyma.18G266200 hypothetical protein NA 1Chr18:55065716–55066843 (-)1.488e-11
Glyma.19G187900 hypothetical protein AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 1Chr19:44599748–44609219 (-)7.307e-12