Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37398

Metabolite ID
P37398
Deionized mass
532.3374 Da
Average m/z
533.3405
Average RT
18.5931
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
73
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

73 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)7.782e-13
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)9.837e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 2Chr18:55076548–55086297 (+)6.739e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)3.095e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.058e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)9.786e-11
Glyma.02G222400 hypothetical protein AT2G36460:FBA6:Aldolase superfamily protein 1Chr02:40998557–41001678 (-)1.138e-13
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)8.259e-11
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)6.309e-14
Glyma.04G044800 LBD16 LBD domain-containing transcription factor NA 1Chr04:3582233–3583098 (-)7.78e-13
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.231e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)7.59e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)6.375e-11
Glyma.04G103500 hypothetical protein AT1G78110:AT1G78110:nucleolar GTP-binding protein 1Chr04:9624916–9626694 (-)3.611e-12
Glyma.04G103800 hypothetical protein NA 1Chr04:9705282–9705434 (+)1.169e-11
Glyma.05G112300 hypothetical protein NA 1Chr05:29852015–29852896 (-)9.528e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.726e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.726e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.726e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.62e-12
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)3.72e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.239e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.077e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.041e-18
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.572e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.572e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)1.801e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)3.187e-11
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 1Chr06:14104416–14111842 (+)5.943e-13
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)4.096e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)9.52e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)5.275e-11
Glyma.08G214500 hypothetical protein AT1G15740:AT1G15740:Leucine-rich repeat family protein 1Chr08:17333345–17342698 (+)4.647e-12
Glyma.08G215400 hypothetical protein AT2G22750:AT2G22750:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:17463087–17467014 (+)6.65e-12
Glyma.08G215500 hypothetical protein AT2G22750:AT2G22750:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:17476921–17480079 (+)6.65e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.559e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.918e-11
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)3.055e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)9.694e-12
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 1Chr09:49668985–49676216 (-)1.43e-12
Glyma.09G281700 hypothetical protein NA 1Chr09:49705303–49733182 (-)1.43e-12
Glyma.11G109100 hypothetical protein NA 1Chr11:8322727–8324868 (-)2.81e-12
Glyma.11G109900 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 1Chr11:8378708–8386493 (-)2.714e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)6.975e-12
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)5.968e-12
Glyma.13G067200 hypothetical protein NA 1Chr13:16688567–16689544 (-)1.724e-11
Glyma.13G067500 hypothetical protein NA 1Chr13:16729033–16733978 (+)1.906e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.698e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.782e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.501e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.099e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.86e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.099e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.099e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)8.018e-13
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)5.192e-12
Glyma.16G105300 hypothetical protein AT4G19120:ERD3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:21299154–21305321 (-)3.462e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.02e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)8.879e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.267e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)9.837e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.091e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.091e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.897e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.897e-11
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 1Chr18:3846050–3851668 (+)2.985e-11
Glyma.18G044700 hypothetical protein NA 1Chr18:3846777–3847566 (+)2.985e-11
Glyma.18G044800 hypothetical protein NA 1Chr18:3854125–3856926 (+)2.985e-11
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)4.908e-12
Glyma.18G265500 hypothetical protein AT5G39250:AT5G39250:F-box family protein 1Chr18:55019514–55022070 (-)2.694e-13
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)4.864e-12
Glyma.18G272000 hypothetical protein NA 1Chr18:55503155–55508039 (+)6.141e-11
Glyma.18G272100 hypothetical protein AT5G15630:IRX6:COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 1Chr18:55506268–55509726 (-)6.141e-11