Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37396

Metabolite ID
P37396
Deionized mass
1024.4889 Da
Average m/z
1025.4942
Average RT
18.5924
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
36
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

36 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.598e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)2.956e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)2.817e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)2.817e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)2.817e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)8.471e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)2.956e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.598e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.514e-16
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)2.253e-13
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.598e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.685e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.441e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)5.419e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.687e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.097e-11
Glyma.09G237900 hypothetical protein NA 1Chr09:45960580–45964267 (+)8.069e-12
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)8.982e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)3.696e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)2.502e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.309e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)2.817e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)2.817e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)2.817e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)2.817e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)2.817e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)3.347e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)3.347e-11
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)4.318e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.356e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)4.967e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)2.292e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.604e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.032e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.032e-13
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.822e-11