Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37286

Metabolite ID
P37286
Deionized mass
503.2028 Da
Average m/z
504.2117
Average RT
18.5225
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.389e-13
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.726e-11
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)6.239e-11
Glyma.01G034300 hypothetical protein NA 2Chr01:3573149–3579461 (-)3.026e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.369e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)8.95e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.26e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.26e-12
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)7.542e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.158e-13
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)3.628e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.378e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)3.001e-15
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)1.104e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.04e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.681e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.496e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.741e-12
Glyma.08G199700 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr08:16130591–16137703 (+)5.634e-11
Glyma.08G199800 hypothetical protein NA 1Chr08:16137933–16142956 (-)5.634e-11
Glyma.08G199900 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr08:16146033–16151741 (+)5.634e-11
Glyma.08G200200 hypothetical protein NA 1Chr08:16187816–16191151 (+)7.773e-13
Glyma.08G200500 hypothetical protein NA 1Chr08:16217120–16222339 (+)9.755e-13
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)2.722e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)2.722e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)9.819e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.907e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.907e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.906e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.906e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.276e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)8.844e-12
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)8.141e-15
Glyma.11G037400 hypothetical protein NA 1Chr11:2693616–2698160 (+)3.39e-11
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)3.891e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.034e-15
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.034e-15
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.605e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.605e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.808e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.95e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.579e-12
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)1.21e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)4.476e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.953e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.953e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.26e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.747e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.747e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)3.06e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.389e-13
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)3.297e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.726e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.726e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.726e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.726e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)7.806e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.629e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.24e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)6.239e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)6.239e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.093e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.093e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)2.29e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.592e-13