Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37083

Metabolite ID
P37083
Deionized mass
1102.3780 Da
Average m/z
1103.3803
Average RT
18.4325
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
119
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

119 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)3.97e-14
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.147e-14
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)6.189e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)2.031e-12
Glyma.10G055300 hypothetical protein AT5G03380:AT5G03380:Heavy metal transport/detoxification superfamily protein 2Chr10:5044375–5046444 (+)5.62e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)5.123e-17
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.236e-15
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.041e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.041e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.473e-15
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)5.858e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.622e-14
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)2.229e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.434e-15
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)1.51e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.147e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.117e-15
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)4.674e-12
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)1.609e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)2.656e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.355e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)8.108e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.124e-14
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.987e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)9.382e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.321e-12
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)2.162e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)7.079e-14
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.609e-11
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)9.557e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)6.461e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)2.973e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)6.924e-12
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)6.924e-12
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)6.924e-12
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)6.924e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.276e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.873e-20
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.383e-17
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.224e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.225e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)8.691e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.619e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.981e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.981e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)9.729e-15
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.524e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.115e-13
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)4.217e-12
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)4.218e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)2.018e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.427e-13
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)6.435e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.012e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)6.484e-12
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)8.175e-12
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)9.101e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)2.564e-13
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.477e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.067e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)3.636e-11
Glyma.10G055100 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr10:5015329–5032990 (+)8.877e-14
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)1.063e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)6.684e-12
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)3.142e-11
Glyma.11G094700 hypothetical protein AT5G08280:HEMC:hydroxymethylbilane synthase 1Chr11:7190632–7195838 (-)2.045e-13
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.029e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.177e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.684e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.684e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)9.33e-11
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)1.916e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.892e-16
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.236e-15
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)6.014e-14
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)5.426e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.314e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.314e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.041e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)3.42e-15
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)7.466e-14
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)8.159e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.927e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.982e-17
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)6.622e-12
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.044e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.044e-12
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)1.321e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.483e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.354e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.917e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.293e-13
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)3.916e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)3.756e-13
Glyma.16G063600 hypothetical protein NA 1Chr16:6255512–6260421 (+)1.982e-13
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)1.327e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)4.904e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)6.189e-13
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)6.189e-13
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)6.189e-13
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)6.189e-13
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)6.902e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.414e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.305e-14
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.451e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.871e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)7.048e-12
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)1.742e-13
Glyma.19G005800 Polyribonucleotide nucleotidyltransferase 2, mitochondrial AT5G14580:AT5G14580:polyribonucleotide nucleotidyltransferase 1Chr19:522587–531382 (-)1.894e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)1.229e-14
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 1Chr19:860974–865476 (+)3.294e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)4.746e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.434e-15
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.046e-19
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.047e-19
Glyma.19G102000 ICE2 AT3G26744:ICE1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:34998146–35001862 (+)9.394e-11
Glyma.19G102200 hypothetical protein AT2G31410:AT2G31410:coiled-coil protein 1Chr19:35024582–35025690 (+)9.394e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.281e-13
Glyma.20G219100 hypothetical protein AT3G02830:ZFN1:zinc finger protein 1 1Chr20:45490419–45496014 (+)7.821e-11