Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36976

Metabolite ID
P36976
Deionized mass
548.2262 Da
Average m/z
549.2302
Average RT
18.3962
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
68
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

68 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 4Chr16:26324650–26336836 (+)3.952e-16
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.271e-11
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)7.902e-16
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)4.727e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)1.33e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)4.26e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.858e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.052e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)6.094e-12
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)4.785e-14
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 2Chr16:33322352–33330062 (+)2.759e-12
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)1.599e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)7.714e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.271e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.206e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.206e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.541e-13
Glyma.03G223300 hypothetical protein AT3G62190:AT3G62190:Chaperone DnaJ-domain superfamily protein 1Chr03:42601145–42604438 (-)8.762e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)5.382e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.474e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.045e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.045e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.045e-12
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)2.55e-12
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)2.55e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)3.774e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.853e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.773e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.049e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.049e-13
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)8.25e-12
Glyma.07G209600 hypothetical protein NA 1Chr07:38037644–38043272 (+)5.164e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)7.334e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.526e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)1.526e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.651e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.651e-12
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)2.732e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.028e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)7.59e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)3.715e-13
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.974e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.934e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.655e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.281e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.281e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)7.873e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.552e-11
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.089e-12
Glyma.13G183400 hypothetical protein NA 1Chr13:29666942–29670201 (+)2.129e-13
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.843e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.008e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)4.295e-11
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)5.033e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.557e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)7.902e-16
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)7.902e-16
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.775e-16
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.266e-13
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)1.134e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.921e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.91e-14
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.91e-14
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)7.714e-12
Glyma.19G030100 hypothetical protein NA 1Chr19:3732644–3733945 (+)4.151e-11
Glyma.19G030500 GmAT133 NA 1Chr19:3779017–3781453 (-)4.151e-11
Glyma.19G031100 hypothetical protein AT3G02170:LNG2:longifolia2 1Chr19:3839225–3845784 (-)5.61e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.785e-11