Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36635

Metabolite ID
P36635
Deionized mass
537.2756 Da
Average m/z
538.2809
Average RT
18.2363
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
80
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

80 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)1.084e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.942e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.335e-11
Glyma.13G183400 hypothetical protein NA 2Chr13:29666942–29670201 (+)9.48e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.588e-14
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.465e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.406e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)4.552e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.335e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)8.624e-14
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.132e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.596e-14
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.47e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)4.197e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)7.885e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.39e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.39e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.264e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.186e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.186e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.186e-12
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)1.216e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.013e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.534e-16
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.866e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.866e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)1.689e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.852e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.266e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)8.577e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)3.863e-11
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)2.142e-11
Glyma.07G136100 hypothetical protein NA 1Chr07:16113273–16117600 (+)6.275e-11
Glyma.07G136500 hypothetical protein AT3G53830:AT3G53830:Regulator of chromosome condensation (RCC1) family protein 1Chr07:16157535–16169721 (+)6.275e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.754e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.69e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.97e-14
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)2.165e-11
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)3.923e-11
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)7.572e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.022e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.022e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)8.123e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.707e-15
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.707e-15
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)6.31e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.942e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.942e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.942e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.942e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)1.081e-16
Glyma.13G319600 hypothetical protein AT5G22740:CSLA02:cellulose synthase-like A02 1Chr13:41398196–41403950 (-)1.134e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)9.515e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.177e-14
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)6.689e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.647e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.879e-16
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.647e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.647e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.688e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.006e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)7.614e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)7.614e-11
Glyma.16G137000 hypothetical protein NA 1Chr16:29418205–29421765 (-)6.263e-11
Glyma.16G137100 hypothetical protein NA 1Chr16:29421091–29421534 (+)6.263e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)2.166e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)3.644e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.425e-14
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)6.736e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.736e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.003e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.942e-12
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)8.779e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)2.823e-11
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)3.704e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)1.782e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)6.173e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)6.173e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.078e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.078e-15