Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P35472

Metabolite ID
P35472
Deionized mass
373.2267 Da
Average m/z
374.2329
Average RT
17.8133
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 7Chr16:36856833–36863994 (-)1.923e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.373e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)1.808e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)2.744e-11
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)8.914e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)6.499e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.682e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.329e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.284e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)7.39e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.845e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.546e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.817e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.078e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.078e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)9.789e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)2.941e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.689e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.307e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.689e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.689e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.307e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)8.458e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)7.464e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)7.464e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.185e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.373e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.373e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.373e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.373e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.49e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)3.403e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.558e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.389e-13
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.914e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.149e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.149e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.808e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)4.377e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.156e-14
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.156e-14
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 1Chr18:48258271–48266554 (-)3.321e-12