Overview Annotation GWAS Evidence Associated genes

P35412

Metabolite ID
P35412
Deionized mass
434.2180 Da
Average m/z
435.2256
Average RT
17.7889
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
155
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

155 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)5.655e-11
Glyma.18G090600 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 4Chr18:8991445–9001857 (-)9.591e-11
Glyma.05G164700 hypothetical protein NA 3Chr05:35543931–35549196 (-)7.105e-17
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.34e-12
Glyma.13G224800 hypothetical protein NA 3Chr13:33748627–33756494 (-)4.207e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 2Chr10:2485817–2497071 (-)7.77e-16
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)4.563e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.612e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.527e-16
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.527e-16
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.844e-12
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)1.207e-13
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.452e-12
Glyma.18G090100 hypothetical protein NA 2Chr18:8939839–8941585 (+)9.591e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.514e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.514e-11
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)2.022e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)6.29e-12
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)6.371e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)5.581e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)4.466e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)2.081e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.413e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.169e-14
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.434e-13
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)1.284e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)9.142e-15
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)1.737e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)1.737e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)1.737e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.334e-16
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)2.985e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.07e-15
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.001e-15
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.001e-15
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.085e-17
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.332e-16
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.332e-16
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.332e-16
Glyma.05G160700 hypothetical protein AT1G29270:AT1G29270:transcription factor bHLH35-like protein 1Chr05:35250207–35251693 (+)5.995e-11
Glyma.05G164500 hypothetical protein AT5G46420:AT5G46420:16S rRNA processing protein RimM family 1Chr05:35525530–35532374 (-)7.131e-11
Glyma.05G164600 hypothetical protein NA 1Chr05:35538676–35542389 (+)7.13e-11
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)4.93e-11
Glyma.05G195400 hypothetical protein AT5G08740:NDC1:NAD(P)H dehydrogenase C1 1Chr05:37969923–37975033 (+)6.704e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1.845e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.16e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.871e-15
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)7.097e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)7.097e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)7.097e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)3.081e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)3.081e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.02e-18
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.02e-18
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.581e-14
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)8.074e-15
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)6.711e-11
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)6.711e-11
Glyma.06G175200 SEOd NA 1Chr06:14822478–14829186 (-)1.002e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)8.287e-12
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.577e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)7.96e-13
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.577e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.577e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)7.96e-13
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)1.512e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)4.024e-12
Glyma.06G301000 hypothetical protein NA 1Chr06:49001317–49005605 (+)1.569e-11
Glyma.06G301100 hypothetical protein AT2G16030:AT2G16030:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr06:49013527–49014231 (+)5.288e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.98e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)7.857e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)9.096e-14
Glyma.07G080900 hypothetical protein NA 1Chr07:7381339–7405785 (+)3.587e-11
Glyma.08G039600 hypothetical protein NA 1Chr08:3107698–3116601 (-)3.898e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)9.175e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.14e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)5.864e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.432e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)3.543e-13
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)2.908e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)4.103e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)7.502e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)7.79e-12
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)7.77e-16
Glyma.10G028600 hypothetical protein NA 1Chr10:2487313–2489838 (+)4.544e-12
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)8.721e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.233e-14
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.233e-14
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)8.527e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)8.527e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)8.777e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)3.641e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.197e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.197e-13
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)3.905e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.395e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.097e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.097e-11
Glyma.13G055200 hypothetical protein AT3G02200:AT3G02200:Proteasome component (PCI) domain protein 1Chr13:15229290–15234025 (-)1.176e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.34e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.923e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.115e-16
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.115e-16
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.527e-16
Glyma.13G224300 hypothetical protein NA 1Chr13:33703380–33715996 (-)4.207e-11
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)5.917e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.773e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)8.526e-11
Glyma.15G069700 hypothetical protein AT1G11120:AT1G11120:CTTNBP 2 amino-terminal-like protein 1Chr15:5327863–5332137 (-)2.556e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)2.131e-15
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)2.131e-15
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)7.035e-13
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)3.959e-12
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)3.398e-11
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 1Chr15:8705907–8710609 (-)6.424e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.978e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)3.885e-11
Glyma.16G064100 hypothetical protein NA 1Chr16:6322034–6325343 (-)1.705e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.493e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)8.303e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.08e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.173e-11
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)8.263e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.459e-11
Glyma.16G141500 bZIP117 AT4G36730:GBF1:G-box binding factor 1 1Chr16:29960697–29967081 (-)3.624e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.905e-14
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.847e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.899e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.88e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.88e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)8.695e-13
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.452e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)7.748e-11
Glyma.18G026200 hypothetical protein AT2G40150:TBL28:TRICHOME BIREFRINGENCE-LIKE 28__AT3G55990:ESK1:trichome birefringence-like protein (DUF828) 1Chr18:1953183–1957001 (-)4.071e-12
Glyma.18G089800 hypothetical protein AT5G55250:IAMT1:IAA carboxylmethyltransferase 1 1Chr18:8921173–8925579 (+)9.591e-11
Glyma.18G090300 hypothetical protein AT5G55210:AT5G55210:uncharacterized protein 1Chr18:8954961–8957926 (+)9.591e-11
Glyma.18G090500 hypothetical protein AT4G26810:AT4G26810:SWIB/MDM2 domain superfamily protein 1Chr18:8979176–8986302 (-)9.591e-11
Glyma.18G090800 hypothetical protein AT3G20300:AT3G20300:extracellular ligand-gated ion channel protein (DUF3537) 1Chr18:9018768–9024832 (-)9.591e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)2.031e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)2.189e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)2.031e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)2.031e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)1.577e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)2.208e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.912e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.912e-15
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.126e-14
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.147e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.799e-20
Glyma.20G099900 hypothetical protein AT5G23390:AT5G23390:polygalacturonase inhibitor (DUF639) 1Chr20:34312783–34318966 (+)4.112e-11
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)5.655e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)1.489e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.772e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)9.274e-11
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 1Chr20:35498179–35500565 (-)5.119e-11