Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P35219

Metabolite ID
P35219
Deionized mass
214.1188 Da
Average m/z
215.1264
Average RT
17.7069
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
127
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

127 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)1.376e-15
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)3.757e-11
Glyma.02G188300 hypothetical protein NA 2Chr02:35008552–35027979 (-)5.709e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)1.088e-16
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)3.306e-14
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.974e-13
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)2.02e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.797e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)3.529e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.338e-15
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)1.1e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.359e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)6.5e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.479e-14
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.479e-14
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)6.907e-14
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)6.785e-11
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)4.597e-14
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.685e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)8.04e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)3.731e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)2.441e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.028e-14
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)2.838e-12
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)3.31e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.444e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.714e-14
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)6.015e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.69e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.378e-14
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)4.633e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)7.11e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)7.11e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.647e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.962e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.962e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.962e-15
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)3.071e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.685e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.952e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.056e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.056e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)5.468e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.701e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)3.626e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)4.53e-11
Glyma.06G324300 GmCSyGT1 NA 1Chr06:51189321–51193954 (-)3.299e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)4.499e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)4.499e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.663e-14
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)4.357e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)5.758e-12
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)3.498e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)1.015e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)9.257e-12
Glyma.08G142200 hypothetical protein NA 1Chr08:10833827–10834390 (-)5.86e-12
Glyma.08G142400 WRKY6 WRKY transcription factor 6 NA 1Chr08:10843433–10846761 (-)5.86e-12
Glyma.08G142500 hypothetical protein NA 1Chr08:10848944–10850129 (+)2.482e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)7.099e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)7.158e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.489e-15
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.116e-14
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)6.241e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.069e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.958e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.187e-20
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.507e-18
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)1.259e-11
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)8.765e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.007e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.007e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.007e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.007e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.301e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.593e-13
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)1.003e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)3.246e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.845e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.654e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)9.818e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)9.819e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)9.819e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)9.819e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.289e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.289e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.289e-13
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)1.185e-14
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.581e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.581e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.52e-15
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.52e-15
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.365e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.621e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.226e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.226e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)3.14e-11
Glyma.13G149700 hypothetical protein AT3G10040:AT3G10040:sequence-specific DNA binding transcription factor 1Chr13:26321941–26324172 (+)3.219e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)6.75e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.628e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)8.635e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.607e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.607e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.607e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.787e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.033e-12
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)8.229e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)6.239e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)7.624e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.589e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.431e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.17e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.31e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)7.585e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)7.586e-12
Glyma.16G165300 hypothetical protein NA 1Chr16:32447317–32449688 (-)7.731e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.715e-12
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)1.961e-12
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)8.104e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.433e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.426e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)6.351e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.338e-15
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.097e-21
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.097e-21
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)9e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)9.832e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.457e-13