Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34790

Metabolite ID
P34790
Deionized mass
328.2953 Da
Average m/z
329.3022
Average RT
17.5274
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
69
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

69 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.248e-16
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 2Chr06:14104416–14111842 (+)3.761e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)5.689e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)5.689e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)5.689e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.88e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)7.936e-15
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)8.777e-13
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)5.573e-11
Glyma.01G230400 hypothetical protein AT2G40935:AT2G40935:PLAC8 family protein 1Chr01:55782953–55786502 (+)9.482e-11
Glyma.01G230800 hypothetical protein AT4G10050:AT4G10050:esterase/lipase/thioesterase family protein 1Chr01:55803995–55808033 (+)1.853e-12
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 1Chr01:55836387–55840615 (+)2.491e-13
Glyma.01G231700 hypothetical protein AT4G10180:DET1:light-mediated development protein 1 / deetiolated1 (DET1) 1Chr01:55856415–55863866 (+)1.242e-11
Glyma.01G231900 hypothetical protein AT1G71500:AT1G71500:Rieske (2Fe-2S) domain-containing protein 1Chr01:55869836–55872417 (+)1.855e-12
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)1.065e-13
Glyma.01G234300 hypothetical protein AT5G16680:AT5G16680:RING/FYVE/PHD zinc finger superfamily protein 1Chr01:56040889–56049889 (-)9.752e-12
Glyma.01G235200 hypothetical protein AT1G05460:SDE3:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr01:56103784–56110667 (-)1.872e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.272e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.272e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.272e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.284e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.42e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.409e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.409e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.306e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.546e-12
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)1.769e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)1.769e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)2.548e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)1.99e-11
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)3.749e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.261e-11
Glyma.08G294900 hypothetical protein AT1G59720:CRR28:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:41002768–41005138 (-)2.993e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.939e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.014e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.196e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.321e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)5.689e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)5.689e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)5.689e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)5.689e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)5.689e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)7.242e-13
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 1Chr09:49668985–49676216 (-)6.665e-11
Glyma.09G281700 hypothetical protein NA 1Chr09:49705303–49733182 (-)6.665e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)9.23e-13
Glyma.11G184400 hypothetical protein NA 1Chr11:25256684–25259757 (+)6.007e-12
Glyma.11G184600 hypothetical protein AT4G08960:AT4G08960:phosphotyrosyl phosphatase activator (PTPA) family protein 1Chr11:25265163–25267323 (-)3.559e-12
Glyma.11G184900 hypothetical protein AT3G44530:HIRA:histone chaperone HIRA-like protein 1Chr11:25289268–25298978 (+)3.559e-12
Glyma.11G185000 hypothetical protein AT4G33790:CER4:Jojoba acyl CoA reductase-related male sterility protein 1Chr11:25310949–25318127 (+)1.993e-11
Glyma.11G185200 hypothetical protein AT4G33790:CER4:Jojoba acyl CoA reductase-related male sterility protein 1Chr11:25361462–25369894 (+)1.993e-11
Glyma.11G185300 hypothetical protein AT3G44540:FAR4:fatty acid reductase 4 1Chr11:25389935–25398374 (-)1.993e-11
Glyma.11G185500 hypothetical protein AT5G20890:AT5G20890:TCP-1/cpn60 chaperonin family protein 1Chr11:25416977–25424958 (-)1.993e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)3.389e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.916e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.916e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.128e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.724e-15
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.777e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)7.845e-11
Glyma.13G053000 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 1Chr13:15046821–15050021 (+)8.324e-11
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 1Chr13:24601574–24606756 (-)5.644e-11
Glyma.13G133900 hypothetical protein NA 1Chr13:24613843–24616128 (+)5.644e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.072e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.248e-16
Glyma.17G092500 hypothetical protein NA 1Chr17:7216270–7218031 (+)2.233e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)2.649e-14
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)1.06e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.506e-13