Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34440

Metabolite ID
P34440
Deionized mass
438.3468 Da
Average m/z
439.3537
Average RT
17.4138
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
75
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

75 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.886e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)5.673e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.066e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.223e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)4.922e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.56e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.213e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.286e-15
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)8.615e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.336e-14
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)3.129e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.247e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.562e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.562e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.84e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.603e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)8.603e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)8.603e-15
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.812e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.409e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.431e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.85e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.85e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.886e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.886e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.082e-12
Glyma.09G059600 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 1Chr09:5504630–5507434 (+)1.394e-15
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 1Chr09:5513108–5520158 (+)1.394e-15
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.394e-15
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.096e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.885e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.542e-13
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)3.575e-14
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.221e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.221e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.221e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.221e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.629e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.839e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.137e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.137e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.767e-14
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.767e-14
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.329e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.329e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)5.673e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.912e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.912e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.809e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.115e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.223e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.895e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.948e-15
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.895e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.895e-15
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.886e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.695e-16
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.393e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.349e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)5.801e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)3.503e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.649e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.527e-15
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.577e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.577e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)7.772e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)2.644e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.211e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)8.569e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)1.024e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)9.449e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)9.449e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)8.029e-13
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)4.922e-11
Glyma.20G223300 hypothetical protein AT1G09770:CDC5:cell division cycle 5 1Chr20:45791239–45803369 (-)8.947e-11