Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34329

Metabolite ID
P34329
Deionized mass
370.1112 Da
Average m/z
371.1158
Average RT
17.3698
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
126
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

126 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)3.062e-13
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)9.856e-11
Glyma.04G129500 hypothetical protein AT3G21060:RBL:Transducin/WD40 repeat-like superfamily protein 2Chr04:18096368–18109438 (+)9.822e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)1.576e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.63e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)1.492e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)1.315e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)1.652e-11
Glyma.20G013100 hypothetical protein NA 2Chr20:1134080–1135710 (-)2.262e-12
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 2Chr20:34184591–34191923 (+)7.863e-12
Glyma.01G001300 hypothetical protein AT2G07050:CAS1:cycloartenol synthase 1 1Chr01:227021–237987 (-)7.729e-12
Glyma.01G039700 hypothetical protein AT1G10385:AT1G10385:Vps51/Vps67 family (components of vesicular transport) protein 1Chr01:4304713–4310259 (-)5.593e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)5.111e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)7.403e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.613e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.613e-13
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)7.434e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.594e-14
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)1.365e-13
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.379e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)9.897e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)6.131e-11
Glyma.04G124600 hypothetical protein NA 1Chr04:16329983–16332898 (-)5.261e-11
Glyma.04G129600 hypothetical protein NA 1Chr04:18110585–18112762 (+)9.822e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.869e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.195e-14
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)5.283e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)5.749e-12
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)2.19e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)2.19e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.406e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)8.111e-13
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)8.111e-13
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)8.168e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)6.601e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)6.601e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)2.472e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)2.472e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)6.601e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)6.583e-12
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 1Chr07:6307073–6313498 (-)7.06e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)9.272e-12
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)9.272e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)2.442e-13
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)7.423e-11
Glyma.07G096300 hypothetical protein NA 1Chr07:9025738–9030949 (-)5.967e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)7.95e-14
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.579e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)2.077e-14
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.63e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.63e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.63e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.63e-11
Glyma.08G331100 hypothetical protein AT4G26620:AT4G26620:Sucrase/ferredoxin-like family protein 1Chr08:44883493–44888239 (+)9.202e-11
Glyma.08G331200 hypothetical protein AT4G12590:AT4G12590:ER membrane protein complex subunit-like protein (Protein of unknown function DUF106, transmembrane) 1Chr08:44892503–44895611 (-)9.202e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)4.849e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.682e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.619e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.861e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)2.995e-12
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)4.492e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)1.209e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)8.998e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)6.95e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.216e-13
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.216e-13
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)1.853e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.51e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.51e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.51e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.51e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.641e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.785e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.642e-13
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)2.472e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.636e-14
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.636e-14
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.493e-11
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1Chr14:3343611–3346483 (+)4.323e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.201e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)3.169e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)3.169e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.706e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.063e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.707e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.707e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.23e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.503e-14
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)6.865e-12
Glyma.15G257500 hypothetical protein NA 1Chr15:48713244–48717192 (+)8.582e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)2.473e-12
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)2.473e-12
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)9.88e-13
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.708e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.708e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)7.123e-14
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)3.951e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)3.974e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.492e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)7.87e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.426e-13
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)1.028e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.045e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)9.354e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)9.353e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.704e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)1.704e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.536e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.354e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.354e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)1.411e-15
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)4.518e-14
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)3.634e-13
Glyma.18G300500 hypothetical protein NA 1Chr18:57841316–57843280 (+)2.685e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)2.091e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)1.053e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.047e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.047e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)9.539e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.077e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.077e-14
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.188e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)7.908e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.153e-18
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.341e-11
Glyma.20G099900 hypothetical protein AT5G23390:AT5G23390:polygalacturonase inhibitor (DUF639) 1Chr20:34312783–34318966 (+)1.775e-11