Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34165

Metabolite ID
P34165
Deionized mass
282.1752 Da
Average m/z
283.1828
Average RT
17.3130
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
121
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

121 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.045e-14
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.565e-11
Glyma.06G090100 hypothetical protein NA 2Chr06:6985471–6996418 (+)1.328e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.054e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)1.67e-16
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)1.966e-19
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.7e-17
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.215e-18
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 2Chr12:37131153–37134096 (+)1.051e-13
Glyma.12G212500 hypothetical protein NA 2Chr12:37150677–37158587 (+)7.667e-12
Glyma.12G213100 hypothetical protein AT3G20560:PDIL5-3:PDI-like 5-3__AT4G27080:PDIL5-4:PDI-like 5-4 2Chr12:37207799–37215685 (+)1.92e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)9.703e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)9.408e-19
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)3.951e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)2.496e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.565e-11
Glyma.20G019300 hypothetical protein AT2G35110:GRL:transcription activator 2Chr20:1999216–2021765 (-)4.783e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.478e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.478e-12
Glyma.02G212500 hypothetical protein AT2G33735:AT2G33735:Chaperone DnaJ-domain superfamily protein 1Chr02:39851468–39854914 (-)3.384e-11
Glyma.02G213100 hypothetical protein NA 1Chr02:39917394–39920713 (-)5.897e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.378e-14
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)3.172e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)9.762e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.195e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.195e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.049e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.655e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.655e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.655e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.063e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.526e-17
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)4.46e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)3.889e-11
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)2.124e-11
Glyma.06G090200 hypothetical protein NA 1Chr06:6994887–6999658 (-)1.328e-12
Glyma.06G090300 hypothetical protein AT1G09980:AT1G09980:Putative serine esterase family protein__AT1G58350:ZW18:Putative serine esterase family protein 1Chr06:7005790–7019054 (+)1.328e-12
Glyma.06G090400 hypothetical protein AT5G49650:XK-2:xylulose kinase-2 1Chr06:7022045–7025738 (+)1.328e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.598e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.598e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.598e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.765e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.765e-12
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)4.417e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.34e-17
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.34e-17
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)9.031e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.016e-13
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.448e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)5.764e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)5.764e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)3.845e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)3.845e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)7.582e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)8.509e-14
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.506e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)1.506e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)2.808e-12
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)4.53e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)7.036e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)5.394e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)7.882e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)7.882e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)7.882e-11
Glyma.11G126100 hypothetical protein AT1G08450:CRT3:calreticulin 3 1Chr11:9581659–9588340 (+)2.583e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.044e-15
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.044e-15
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.044e-15
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.802e-14
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.802e-14
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.904e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.904e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)2.553e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.67e-16
Glyma.12G202500 hypothetical protein AT1G03600:PSB27:photosystem II family protein 1Chr12:36301835–36304669 (+)5.716e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.072e-18
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.215e-18
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)7.14e-15
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)4.75e-14
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)7.114e-13
Glyma.12G213300 hypothetical protein AT4G27100:AT4G27100:Ypt/Rab-GAP domain of gyp1p superfamily protein 1Chr12:37219675–37228348 (+)9.443e-11
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)5.955e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)9.703e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.995e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.995e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.995e-11
Glyma.14G198100 hypothetical protein NA 1Chr14:46337677–46340654 (+)4.857e-16
Glyma.14G198800 hypothetical protein AT1G07030:AT1G07030:Mitochondrial substrate carrier family protein 1Chr14:46375963–46379746 (-)1.432e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.407e-19
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)6.008e-12
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 1Chr14:46768802–46772377 (+)3.056e-11
Glyma.14G202500 hypothetical protein NA 1Chr14:46773824–46775761 (+)3.056e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.179e-13
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)1.092e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)8.272e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.815e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.045e-14
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)1.153e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.379e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.669e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.686e-11
Glyma.16G157200 hypothetical protein AT1G71850:AT1G71850:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr16:31774664–31777363 (+)8.4e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.692e-13
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.693e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.826e-14
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)4.245e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)8.097e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.097e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)2.734e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.223e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)7.721e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)1.09e-11
Glyma.18G212700 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr18:49942123–49944169 (-)1.649e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)7.106e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.503e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.503e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.215e-12
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)2.405e-11
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)1.364e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)7.444e-16
Glyma.20G107000 hypothetical protein NA 1Chr20:34968161–34968457 (+)3.055e-12