Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34124

Metabolite ID
P34124
Deionized mass
806.2911 Da
Average m/z
807.2980
Average RT
17.3004
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
80
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

80 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.559e-16
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)3.245e-11
Glyma.19G037200 hypothetical protein AT5G15680:AT5G15680:ARM repeat superfamily protein 3Chr19:5178930–5212367 (+)1.997e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)5.982e-13
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)5.982e-13
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)5.982e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.816e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)6.739e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.288e-16
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.288e-16
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.559e-16
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)6.194e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.032e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.609e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)7.985e-13
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.805e-14
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.354e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.772e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.772e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.776e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.66e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.66e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.66e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.446e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)7.395e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.644e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.342e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.244e-15
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)3.821e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)3.821e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)3.821e-11
Glyma.06G322000 hypothetical protein AT5G56170:LLG1:LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 1Chr06:51042976–51045446 (-)7.731e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.063e-13
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)7.341e-11
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 1Chr08:14738283–14742033 (+)8.768e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)4.201e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)1.095e-13
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)6.637e-14
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)6.227e-16
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)3.697e-12
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)3.697e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)5.982e-13
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)5.982e-13
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)5.982e-13
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.839e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)5.982e-13
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)5.982e-13
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)8.366e-12
Glyma.11G163300 WRKY19 WRKY transcription factor 19 NA 1Chr11:15312631–15316628 (+)3.884e-11
Glyma.11G223200 hypothetical protein NA 1Chr11:31833899–31837181 (+)1.158e-13
Glyma.11G223400 hypothetical protein NA 1Chr11:31842750–31844002 (-)4.817e-12
Glyma.11G224000 hypothetical protein NA 1Chr11:31892279–31894201 (-)1.522e-12
Glyma.11G224600 hypothetical protein NA 1Chr11:31955324–31960347 (+)4.563e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.138e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.138e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.844e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.504e-15
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.504e-15
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.288e-16
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.165e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.289e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.933e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)3.096e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.93e-13
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)4.466e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)4.466e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.752e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)3.245e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)8.33e-14
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.33e-14
Glyma.19G031200 hypothetical protein NA 1Chr19:3870532–3874170 (-)6.033e-11
Glyma.19G032500 hypothetical protein NA 1Chr19:4140729–4141955 (-)2.856e-11
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)6.124e-12
Glyma.19G037400 hypothetical protein AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein 1Chr19:5224298–5228610 (-)1.997e-12
Glyma.19G038000 hypothetical protein AT3G02350:GAUT9:galacturonosyltransferase 9 1Chr19:5321094–5324327 (+)1.997e-12
Glyma.19G038300 hypothetical protein NA 1Chr19:5381177–5383149 (+)1.997e-12
Glyma.19G038400 hypothetical protein AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein 1Chr19:5386122–5388865 (+)1.997e-12
Glyma.19G040100 hypothetical protein AT3G02460:AT3G02460:Ypt/Rab-GAP domain of gyp1p superfamily protein 1Chr19:5773912–5781906 (-)1.045e-11
Glyma.19G041000 hypothetical protein NA 1Chr19:5964641–5965947 (-)1.045e-11
Glyma.20G002800 hypothetical protein NA 1Chr20:259703–260884 (+)1.922e-11