Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34024

Metabolite ID
P34024
Deionized mass
686.2048 Da
Average m/z
687.2112
Average RT
17.2543
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.293e-18
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)4.417e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.173e-11
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)2.497e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.289e-13
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)5.547e-12
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)5.547e-12
Glyma.03G036600 hypothetical protein NA 1Chr03:4432910–4435002 (-)1.944e-11
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 1Chr03:4472672–4477787 (-)1.068e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.222e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)3.607e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.999e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.833e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.11e-11
Glyma.06G079500 hypothetical protein NA 1Chr06:6107326–6110770 (+)3.097e-11
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)8.69e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.052e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.23e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.23e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.173e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.581e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.88e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.581e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.581e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.959e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.56e-12
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)4.236e-11
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)4.236e-11
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)4.236e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.351e-16
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.293e-18
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)7.696e-15
Glyma.16G112800 hypothetical protein AT1G30590:AT1G30590:RNA polymerase I specific transcription initiation factor RRN3 protein__AT2G34750:AT2G34750:RNA pol… 1Chr16:25033921–25041652 (+)2.477e-12
Glyma.16G112900 hypothetical protein AT5G65950:AT5G65950:trafficking protein particle complex subunit-like protein 1Chr16:25064625–25072914 (-)2.477e-12
Glyma.16G114900 hypothetical protein NA 1Chr16:25456379–25485759 (+)2.477e-12
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)2.317e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.478e-11
Glyma.18G251400 hypothetical protein NA 1Chr18:53754942–53759244 (-)4.932e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.323e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)6.185e-14
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.091e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.091e-11