Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34004

Metabolite ID
P34004
Deionized mass
364.1508 Da
Average m/z
365.1583
Average RT
17.2492
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.798e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)9.574e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.178e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.717e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.717e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)4.56e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.122e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)2.425e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)2.425e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)8.39e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)9.283e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.802e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.976e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.687e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.687e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.937e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.937e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.937e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.937e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.731e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.653e-14
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)5.305e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.118e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.748e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.748e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.748e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.748e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.868e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.868e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.574e-15
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.764e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.762e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)7.033e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.602e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.524e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.178e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.758e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)6.105e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)7.449e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)1.513e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)8.068e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.335e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.335e-11