Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33980

Metabolite ID
P33980
Deionized mass
882.3874 Da
Average m/z
883.3940
Average RT
17.2418
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
61
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

61 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)8.853e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.138e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.641e-12
Glyma.15G024500 hypothetical protein AT3G13810:IDD11:indeterminate(ID)-domain 11 2Chr15:1970818–1978651 (-)1.736e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)6.741e-13
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)1.96e-14
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)9.126e-17
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)3.645e-20
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)8.668e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.672e-12
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 1Chr03:36109689–36112241 (+)3.279e-13
Glyma.03G145800 hypothetical protein AT5G06710:HAT14:homeobox leucine zipper protein 1Chr03:36122932–36125124 (+)3.394e-12
Glyma.03G145900 hypothetical protein AT5G06700:AT5G06700:trichome birefringence-like protein (DUF828) 1Chr03:36127816–36131230 (-)3.394e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)4.956e-15
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)3.671e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.395e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)1.037e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)7.076e-11
Glyma.09G209900 hypothetical protein AT1G31930:XLG3:extra-large GTP-binding protein 3 1Chr09:43412726–43419532 (+)7.053e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)2.112e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.951e-14
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.365e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.365e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.944e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.944e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.944e-12
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)5.067e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)8.292e-12
Glyma.15G024400 hypothetical protein AT1G17620:AT1G17620:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr15:1962152–1963820 (+)3.63e-11
Glyma.15G024900 hypothetical protein AT3G13780:AT3G13780:SMAD/FHA domain-containing protein 1Chr15:2017155–2019411 (+)3.62e-11
Glyma.15G025300 hypothetical protein NA 1Chr15:2042908–2050348 (+)3.62e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.181e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.841e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.181e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.181e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.392e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.378e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)8.755e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)6.741e-13
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)8.853e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)8.853e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)8.853e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)8.853e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.317e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.067e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.578e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.686e-14
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 1Chr16:30434508–30475458 (-)4.287e-11
Glyma.16G144400 hypothetical protein NA 1Chr16:30478942–30480766 (+)9.864e-11
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)3.323e-12
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)4.754e-13
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 1Chr16:30604586–30608656 (+)1.895e-12
Glyma.16G145400 hypothetical protein AT3G12090:TET6:tetraspanin6 1Chr16:30624348–30627475 (+)2.419e-11
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 1Chr16:30630177–30636253 (+)6.649e-13
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)9.126e-17
Glyma.16G145900 hypothetical protein NA 1Chr16:30681265–30689398 (-)1.416e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)3.645e-20
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)8.568e-16
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)5.943e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.326e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.326e-11