Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33945

Metabolite ID
P33945
Deionized mass
975.5047 Da
Average m/z
976.5058
Average RT
17.2229
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
76
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

76 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)7.893e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)2.399e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)2.399e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)2.399e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.282e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.282e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.902e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.692e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.981e-13
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)8.382e-15
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.211e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.969e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.969e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)2.949e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)3.808e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.048e-13
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)5.5e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.818e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)7.131e-12
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)8.002e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)7.975e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)7.975e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)7.974e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)7.975e-11
Glyma.05G233500 hypothetical protein NA 1Chr05:41066769–41067350 (-)7.905e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.635e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.635e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.635e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)8.703e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.968e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.462e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.663e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)7.424e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.455e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)2.399e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)2.399e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)2.399e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)2.34e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)2.399e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)2.399e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)9.451e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)5.534e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)5.61e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)7.823e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.571e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.571e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.096e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.096e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.282e-14
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.008e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.652e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.692e-12
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)1.033e-14
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)8.559e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)8.559e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.36e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.236e-13
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)5.675e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)7.893e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)7.893e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)7.893e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)7.893e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.019e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.705e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.99e-14
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)5.718e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)9.869e-12
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)3.959e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.854e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.854e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)8.382e-15
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)1.289e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)8.125e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.867e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.866e-13
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.341e-11