Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33829

Metabolite ID
P33829
Deionized mass
587.1718 Da
Average m/z
588.1799
Average RT
17.1685
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)6.093e-11
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)8.3e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)1.007e-14
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)8.335e-11
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)3.913e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.06e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.06e-13
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)6.093e-11
Glyma.01G037200 hypothetical protein NA 1Chr01:3946315–3948100 (-)4.151e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.527e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.867e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)7.166e-12
Glyma.04G190900 hypothetical protein AT5G63160:BT1:BTB and TAZ domain protein 1__AT3G48360:BT2:BTB and TAZ domain protein 2 1Chr04:46152356–46155245 (-)6.67e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.602e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.827e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.497e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.507e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)7.064e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.49e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.49e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.491e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)3.894e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.582e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.582e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.977e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.771e-12
Glyma.08G182500 hypothetical protein NA 1Chr08:14639429–14643788 (+)2.365e-12
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)5.711e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)1.821e-12
Glyma.09G070400 hypothetical protein NA 1Chr09:7185981–7189206 (+)9.081e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.118e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.28e-11
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.698e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)9.208e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)6.595e-11
Glyma.10G269400 hypothetical protein NA 1Chr10:49177225–49187919 (-)5.453e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)9.715e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)9.715e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.348e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.535e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)3.513e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)8.851e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)8.851e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.06e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.903e-12
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)6.763e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.134e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.271e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.289e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.774e-11
Glyma.17G038400 hypothetical protein AT3G17330:ECT6:evolutionarily conserved C-terminal region 6 1Chr17:2836787–2841979 (-)3.797e-12
Glyma.17G038500 hypothetical protein NA 1Chr17:2843533–2853547 (-)3.797e-12
Glyma.17G039200 hypothetical protein NA 1Chr17:2903795–2919460 (+)2.175e-11
Glyma.17G039300 hypothetical protein AT4G15230:ABCG30:pleiotropic drug resistance 2__AT4G15233:ABCG42:ABC-2 and Plant PDR ABC-type transporter family protei… 1Chr17:2918657–2932426 (-)8.308e-12
Glyma.17G039400 hypothetical protein NA 1Chr17:2933278–2933816 (+)6.227e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.066e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.1e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.1e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)4.34e-11