Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33665

Metabolite ID
P33665
Deionized mass
497.2114 Da
Average m/z
498.2204
Average RT
17.1080
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 4Chr06:49451501–49461369 (-)2.861e-13
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)7.443e-13
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)2.49e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)4.785e-13
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 2Chr08:9198213–9201688 (-)3.702e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.878e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.384e-17
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)4.017e-14
Glyma.02G203800 hypothetical protein AT4G30935:WRKY32:WRKY DNA-binding protein 32 1Chr02:38920714–38930381 (+)5.099e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)3.114e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)1.025e-14
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)1.025e-14
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)1.025e-14
Glyma.02G304500 hypothetical protein AT5G48300:ADG1:ADP glucose pyrophosphorylase 1 1Chr02:47950037–47954106 (+)2.167e-12
Glyma.06G129400 hypothetical protein AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type 1Chr06:10632042–10640023 (+)2.69e-12
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)8.453e-12
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)8.453e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)6.637e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)2.82e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.861e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.861e-13
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.958e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)2.372e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)4.784e-13
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)1.798e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.878e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.878e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.878e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.878e-12
Glyma.11G117500 hypothetical protein NA 1Chr11:8932743–8933846 (-)5.262e-11
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)5.255e-11
Glyma.15G009700 hypothetical protein NA 1Chr15:751766–753795 (+)4.477e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)2.531e-15
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.932e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.403e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)1.388e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)2.856e-13
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.795e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)7.443e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)8.531e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.531e-12
Glyma.16G210500 hypothetical protein NA 1Chr16:36959125–36962955 (+)4.923e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)5.929e-11
Glyma.19G147000 hypothetical protein NA 1Chr19:40784257–40785271 (-)2.463e-11
Glyma.19G147100 hypothetical protein NA 1Chr19:40799107–40802473 (+)2.463e-11