Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33647

Metabolite ID
P33647
Deionized mass
661.2834 Da
Average m/z
662.2868
Average RT
17.1022
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G122200 hypothetical protein NA 3Chr08:9416766–9429995 (-)1.928e-12
Glyma.08G122600 hypothetical protein NA 2Chr08:9445153–9450502 (+)1.928e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.089e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.06e-16
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)3.912e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)2.805e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.416e-12
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)4.148e-13
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)4.148e-13
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)4.148e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.967e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)6.048e-13
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)6.048e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.637e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)7.783e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.089e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.089e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.089e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.149e-12
Glyma.08G209800 hypothetical protein AT3G15650:AT3G15650:alpha/beta-Hydrolases superfamily protein 1Chr08:16991275–16995651 (+)3.034e-11
Glyma.08G210800 hypothetical protein AT1G80180:AT1G80180:uncharacterized protein 1Chr08:17028376–17029482 (+)3.176e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.653e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.308e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.496e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.496e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.496e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.496e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.825e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)1.654e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)9.587e-14
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)9.587e-14
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)9.587e-14
Glyma.14G198800 hypothetical protein AT1G07030:AT1G07030:Mitochondrial substrate carrier family protein 1Chr14:46375963–46379746 (-)3.893e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.06e-16
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)4.738e-14
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 1Chr14:46768802–46772377 (+)1.449e-12
Glyma.14G202500 hypothetical protein NA 1Chr14:46773824–46775761 (+)1.449e-12
Glyma.15G009700 hypothetical protein NA 1Chr15:751766–753795 (+)6.54e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)9.762e-16
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.072e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)7.291e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)7.291e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)9.179e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)6.132e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.889e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.889e-11
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)6.052e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.397e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.397e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.948e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)7.779e-14
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)3.414e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)5.136e-16
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)3.394e-14