Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33473

Metabolite ID
P33473
Deionized mass
201.1218 Da
Average m/z
202.1292
Average RT
17.0419
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
58
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

58 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.498e-13
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.952e-12
Glyma.12G018000 hypothetical protein NA 2Chr12:1252709–1256330 (-)7.379e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)5.152e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.393e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.393e-15
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.263e-16
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.952e-12
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr02:5645621–5648965 (+)3.431e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)6.7e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.491e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)6.782e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.433e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.197e-14
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.653e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.212e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.707e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.707e-14
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)6.552e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)3.804e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.856e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)3.804e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)3.804e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.856e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.052e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)6.522e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)2.15e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.364e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)6.694e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.054e-14
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.054e-14
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.054e-14
Glyma.12G003500 hypothetical protein AT5G61670:AT5G61670:orange protein 1Chr12:285588–289372 (-)7.937e-11
Glyma.12G015800 hypothetical protein NA 1Chr12:1126280–1132370 (-)4.699e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.339e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)4.025e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.152e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)5.587e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)1.563e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.143e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.143e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.393e-15
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.263e-16
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)6.676e-13
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 1Chr14:46768802–46772377 (+)9.941e-12
Glyma.14G202500 hypothetical protein NA 1Chr14:46773824–46775761 (+)9.941e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.632e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)2.737e-12
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)3.726e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.998e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.498e-13
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)3.471e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.862e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.879e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.535e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.187e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.186e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)8.942e-14