Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32803

Metabolite ID
P32803
Deionized mass
285.5366 Da
Average m/z
286.5453
Average RT
16.8053
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
103
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

103 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.681e-12
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)4.643e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)2.436e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)6.79e-14
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)3.831e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)8.776e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 2Chr03:169480–172727 (+)1.609e-12
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)5.326e-12
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)5.471e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.854e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.208e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.208e-14
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.062e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.389e-15
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)4.317e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.681e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)7.563e-11
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)4.643e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.795e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.006e-11
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 1Chr03:160599–165525 (+)7.672e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)3.63e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.211e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)8.714e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)6.743e-13
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)6.727e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.266e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)2.851e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)2.851e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)6.212e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.047e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.905e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)9.101e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.041e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)7.356e-13
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)7.356e-13
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)7.356e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.671e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.671e-11
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper… 1Chr06:47339957–47343650 (-)6.205e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)5.97e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.987e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)5.97e-13
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)5.97e-13
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.987e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)6.096e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)2.503e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.635e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.854e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.854e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.854e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.854e-13
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 1Chr08:11253074–11256505 (+)3.379e-11
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 1Chr08:14738283–14742033 (+)9.208e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)7.708e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)7.708e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.226e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)6.491e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.706e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.802e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)3.055e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.741e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.741e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.988e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.988e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.282e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.282e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.208e-14
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)1.683e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)6.198e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.589e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)5.048e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.062e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.389e-15
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)1.263e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)1.263e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.507e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)3.792e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)5.311e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)2.436e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)2.436e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)2.436e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)2.436e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)8.391e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.354e-14
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)3.832e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)3.831e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)8.46e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.274e-14
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.129e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.652e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)2.652e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.097e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.097e-11
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)8.102e-12
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)3.951e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.196e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.196e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)8.09e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.812e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)3.876e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.212e-13
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)5.864e-11