Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32646

Metabolite ID
P32646
Deionized mass
1198.5799 Da
Average m/z
1199.5855
Average RT
16.7411
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G034600 hypothetical protein AT1G08750:AT1G08750:Peptidase C13 family 4Chr20:4744687–4759814 (-)9.663e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 3Chr08:11525692–11536927 (+)2.289e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 3Chr16:35170253–35173950 (-)1.191e-14
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)1.066e-12
Glyma.03G135200 hypothetical protein NA 2Chr03:35070964–35078620 (+)2.151e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.964e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)3.426e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)3.792e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)4.898e-11
Glyma.02G025200 hypothetical protein AT1G10410:AT1G10410:CW14 protein (DUF1336) 1Chr02:2237854–2243130 (-)6.419e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.466e-12
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)3.012e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.043e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.833e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.826e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.826e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.826e-14
Glyma.05G221700 hypothetical protein NA 1Chr05:40115849–40120124 (+)3.81e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.183e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.839e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.761e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.916e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.916e-13
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)8.72e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)3.126e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)9.218e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.461e-11
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)1.322e-11
Glyma.08G151100 hypothetical protein NA 1Chr08:11627319–11628691 (+)7.039e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.655e-12
Glyma.11G163300 WRKY19 WRKY transcription factor 19 NA 1Chr11:15312631–15316628 (+)5.939e-12
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)2.006e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)4.448e-14
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)3.955e-14
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.535e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.535e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.358e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)2.202e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)4.89e-14
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.964e-11
Glyma.14G177100 hypothetical protein AT1G22450:COX6B:cytochrome C oxidase 6B 1Chr14:43661177–43665659 (+)5.873e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.746e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.746e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.745e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.37e-11
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 1Chr15:33408140–33467420 (+)7.689e-11
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 1Chr15:49447943–49451741 (+)5.813e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.488e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)2.059e-12
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)2.059e-12
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)2.667e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)5.938e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)6.141e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.316e-11
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)7.327e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.085e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.085e-11
Glyma.20G034400 hypothetical protein NA 1Chr20:4739306–4740139 (-)9.663e-11
Glyma.20G034500 hypothetical protein NA 1Chr20:4742921–4744715 (+)9.663e-11
Glyma.20G034700 hypothetical protein NA 1Chr20:4748250–4749617 (+)9.663e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.922e-14
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)4.683e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)2.047e-13