Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32068

Metabolite ID
P32068
Deionized mass
594.1422 Da
Average m/z
595.1452
Average RT
16.5414
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 6Chr16:36856833–36863994 (-)2.755e-14
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 3Chr16:36806718–36809299 (+)1.769e-13
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)1.319e-15
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)4.868e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)5.397e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.992e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)7.343e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.18e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.105e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.879e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.336e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.409e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.409e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)7.586e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.606e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.468e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.606e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.606e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.468e-11
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)2.036e-13
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)1.752e-12
Glyma.07G010600 hypothetical protein NA 1Chr07:811039–816200 (+)2.129e-11
Glyma.07G010700 hypothetical protein AT3G13730:CYP90D1:cytochrome P450, family 90, subfamily D, polypeptide 1 1Chr07:817488–822276 (+)2.129e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)5.704e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)1.373e-13
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)1.373e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)7.778e-13
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.794e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.882e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.038e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.882e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.882e-13
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.96e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)4.868e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.355e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.134e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.119e-13
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)2.36e-12
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)1.305e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)1.13e-13
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 1Chr18:48258271–48266554 (-)8.403e-14
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)8.844e-12
Glyma.20G217500 hypothetical protein AT5G41950:AT5G41950:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:45312584–45322950 (-)1.514e-12