Overview Annotation GWAS Evidence Associated genes

P31937

Metabolite ID
P31937
Deionized mass
173.1467 Da
Average m/z
174.1553
Average RT
16.4846
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
151
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

151 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.23e-12
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)1.477e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)5.822e-13
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)2.663e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 3Chr13:31727841–31735910 (-)5.88e-13
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.058e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)3.043e-15
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)9.634e-13
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)4.08e-12
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)2.558e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)3.753e-14
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.307e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)5.305e-15
Glyma.13G224800 hypothetical protein NA 2Chr13:33748627–33756494 (-)8.176e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.417e-14
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)6.964e-15
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)5.822e-13
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)9.181e-11
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)7.33e-11
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)7.33e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)6.192e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.777e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)5.683e-14
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.595e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.149e-15
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.566e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.566e-12
Glyma.02G061700 hypothetical protein AT2G23450:AT2G23450:Protein kinase superfamily protein 1Chr02:5577271–5582873 (-)8.326e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)5.942e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)9.007e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.274e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.456e-14
Glyma.03G047100 hypothetical protein AT3G51740:IMK2:inflorescence meristem receptor-like kinase 2 1Chr03:5986288–5990191 (+)4.985e-11
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 1Chr03:36109689–36112241 (+)6.247e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)9.508e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.237e-13
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)8.744e-17
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.704e-11
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 1Chr04:50332008–50336222 (-)3.355e-11
Glyma.04G235400 hypothetical protein AT3G49260:iqd21:IQ-domain 21 1Chr04:50351726–50356449 (-)5.125e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)8.453e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.418e-18
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.995e-26
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.568e-19
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.639e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.639e-14
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)4.801e-12
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)4.801e-12
Glyma.06G175200 SEOd NA 1Chr06:14822478–14829186 (-)3.615e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)7.976e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)8.804e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.472e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.289e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.472e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.472e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.289e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)5.282e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)2.418e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)5.641e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.501e-14
Glyma.08G099800 hypothetical protein NA 1Chr08:7636648–7639681 (+)1.528e-11
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)1.321e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)2.403e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.307e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.307e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.307e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.307e-13
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)2.85e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.594e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.594e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)6.416e-13
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)2.693e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.768e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.764e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.942e-16
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)1.277e-13
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)1.391e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)8.565e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)8.565e-11
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)3.852e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.619e-11
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)2.072e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.583e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.583e-13
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)5.168e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.583e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.583e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.339e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.35e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)7.592e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.075e-14
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)5.88e-13
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)4.692e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)5.88e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.001e-15
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)8.176e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.723e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.257e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.966e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.114e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.539e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.114e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.114e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.539e-15
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)6.472e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)3.157e-14
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)4.903e-12
Glyma.16G063600 hypothetical protein NA 1Chr16:6255512–6260421 (+)3.166e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.23e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)2.323e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)6.135e-12
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)1.145e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.058e-13
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.059e-13
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.058e-13
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.059e-13
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)1.01e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)4.723e-13
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)4.016e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)9.634e-13
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)9.634e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.254e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)3.189e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.212e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.469e-14
Glyma.16G194000 hypothetical protein AT3G48900:AT3G48900:single-stranded DNA endonuclease family protein 1Chr16:35625666–35634395 (-)1.401e-11
Glyma.16G194100 hypothetical protein NA 1Chr16:35633570–35637343 (+)1.401e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)9.836e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.385e-15
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.385e-15
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)7.367e-11
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)7.367e-11
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)7.367e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)3.948e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)2.517e-12
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)4.092e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 1Chr18:47102746–47129707 (+)9.285e-11
Glyma.18G197500 hypothetical protein NA 1Chr18:47377826–47380850 (+)4.518e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)1.04e-12
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.239e-13
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)1.679e-13
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.438e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.438e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.779e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.779e-13
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)8.351e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.458e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.765e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.784e-13
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)1.412e-11
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 1Chr20:35498179–35500565 (-)4.365e-11