Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31116

Metabolite ID
P31116
Deionized mass
238.1915 Da
Average m/z
239.1986
Average RT
16.2364
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G151200 ACSL2 long-chain acyl-CoA synthetase ACSL2 AT3G23790:AAE16:AMP-dependent synthetase and ligase family protein 5Chr05:34489326–34501948 (+)3.784e-13
Glyma.05G150100 hypothetical protein NA 2Chr05:34406314–34406846 (+)3.986e-13
Glyma.05G150200 hypothetical protein NA 2Chr05:34408102–34413897 (-)6.999e-11
Glyma.05G151100 hypothetical protein AT4G19710:AK-HSDH II:aspartate kinase-homoserine dehydrogenase ii 2Chr05:34473194–34488860 (-)3.784e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)2.127e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.127e-11
Glyma.15G140700 hypothetical protein NA 2Chr15:11520847–11522863 (-)2.349e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.392e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.392e-12
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)4.568e-13
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 1Chr03:160599–165525 (+)4.222e-13
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)2.48e-13
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)9.339e-12
Glyma.05G147900 hypothetical protein AT1G27340:LCR:Galactose oxidase/kelch repeat superfamily protein 1Chr05:34213379–34217429 (+)4.674e-11
Glyma.05G148900 hypothetical protein AT1G67320:EMB2813:DNA primase, large subunit family 1Chr05:34323018–34331148 (-)2.198e-11
Glyma.05G149000 hypothetical protein AT5G16740:AT5G16740:Transmembrane amino acid transporter family protein 1Chr05:34336246–34338808 (+)6.999e-11
Glyma.05G149200 hypothetical protein NA 1Chr05:34347910–34353885 (-)1.127e-14
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)1.642e-20
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.642e-20
Glyma.05G150400 hypothetical protein AT3G23730:XTH16:xyloglucan endotransglucosylase/hydrolase 16 1Chr05:34429993–34432911 (+)2.198e-11
Glyma.05G150500 hypothetical protein NA 1Chr05:34435261–34440483 (-)6.999e-11
Glyma.05G150700 hypothetical protein AT1G05530:UGT75B2:UDP-glucosyl transferase 75B2__AT4G14090:AT4G14090:UDP-Glycosyltransferase superfamily protein 1Chr05:34448164–34449900 (+)8.979e-11
Glyma.05G151300 hypothetical protein AT3G23800:SBP3:selenium-binding protein 3 1Chr05:34504794–34509769 (+)6.999e-11
Glyma.05G151500 hypothetical protein AT4G08580:AT4G08580:microfibrillar-associated protein-like protein__AT5G17900:AT5G17900:microfibrillar-associated prote… 1Chr05:34514115–34518199 (-)6.999e-11
Glyma.05G151800 HSF-09 heat stress transcription factor 9 AT4G13980:AT-HSFA5:winged-helix DNA-binding transcription factor family protein 1Chr05:34535641–34540714 (+)2.177e-11
Glyma.05G152200 hypothetical protein NA 1Chr05:34567026–34574255 (-)5.347e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)8.439e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.93e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.127e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.127e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.127e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)2.205e-13
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)2.205e-13
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)6.077e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.424e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.558e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.013e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)6.707e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.45e-11