Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31072

Metabolite ID
P31072
Deionized mass
360.1914 Da
Average m/z
361.1989
Average RT
16.2213
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
72
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

72 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3Chr15:21029024–21058079 (-)1.708e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 3Chr16:35170253–35173950 (-)1.099e-11
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)5.306e-12
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)6.34e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 2Chr03:44064511–44073939 (+)2.415e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.939e-12
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)5.732e-12
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)7.664e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.447e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.447e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.978e-17
Glyma.03G172800 hypothetical protein NA 1Chr03:38686815–38687522 (-)5.208e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.738e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.131e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.131e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.522e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.884e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.884e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.884e-15
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)4.686e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)1.188e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)7.29e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.55e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.529e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.084e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.949e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.949e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)2.151e-13
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)4.456e-11
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)1.891e-11
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)1.891e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)7.5e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)7.5e-11
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 1Chr07:6169729–6172231 (+)6.498e-11
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)4.669e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.926e-13
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.345e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)8.803e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.588e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.588e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)6.493e-11
Glyma.11G105500 hypothetical protein AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 1Chr11:8015639–8020644 (-)1.778e-13
Glyma.11G105600 hypothetical protein NA 1Chr11:8021436–8024175 (+)2.208e-13
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)1.312e-11
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)8.545e-11
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)8.545e-11
Glyma.13G149700 hypothetical protein AT3G10040:AT3G10040:sequence-specific DNA binding transcription factor 1Chr13:26321941–26324172 (+)6.34e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.939e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.435e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.329e-12
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 1Chr15:20964449–20974340 (+)1.708e-11
Glyma.15G192900 hypothetical protein NA 1Chr15:21108370–21110353 (+)1.708e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)5.369e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)5.369e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.182e-11
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 1Chr16:35958085–35960833 (+)7.157e-11
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)3.485e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.683e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.683e-11
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)4.834e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)3.852e-11
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)8.312e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.077e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.034e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.073e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.073e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)4.44e-11
Glyma.20G103800 hypothetical protein AT3G59040:AT3G59040:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:34643077–34647277 (+)6.168e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)5.928e-13
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)4.838e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.959e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.552e-12