Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30571

Metabolite ID
P30571
Deionized mass
190.1344 Da
Average m/z
191.1418
Average RT
16.0757
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
70
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

70 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3Chr15:21029024–21058079 (-)6.786e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)6.112e-12
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)3.059e-11
Glyma.08G149500 hypothetical protein NA 2Chr08:11460264–11465243 (-)3.088e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)3.695e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)4.41e-12
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)2.766e-11
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)2.766e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.149e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)4.792e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)4.491e-14
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.698e-13
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)3.655e-12
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)3.655e-12
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)3.655e-12
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)3.655e-12
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)3.655e-12
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)3.655e-12
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)3.655e-12
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)6.112e-12
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)3.15e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.881e-11
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)7.287e-11
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)7.287e-11
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)3.147e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.206e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.373e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.538e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.59e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.023e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.023e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.023e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.023e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.708e-12
Glyma.11G106400 CYP41 peptidyl-prolyl cis-trans isomerase CYP41 AT4G34960:AT4G34960:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr11:8108697–8114349 (+)7.866e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.067e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.067e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.724e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.724e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.529e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)6.265e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.857e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.076e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.857e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.857e-15
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 1Chr15:20964449–20974340 (+)6.786e-12
Glyma.15G192900 hypothetical protein NA 1Chr15:21108370–21110353 (+)6.786e-12
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 1Chr15:33408140–33467420 (+)2.729e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)4.108e-12
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)9.437e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.515e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.685e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.523e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.541e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.949e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.949e-11
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)4.688e-12
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)4.949e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)1.293e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)2.39e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.333e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)2.333e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)1.723e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.434e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.443e-11
Glyma.19G125300 hypothetical protein AT3G56880:AT3G56880:VQ motif-containing protein__AT2G41010:CAMBP25:calmodulin (CAM)-binding protein of 25 kDa 1Chr19:38346007–38347425 (-)5.689e-11
Glyma.19G125400 hypothetical protein AT3G12390:AT3G12390:Nascent polypeptide-associated complex (NAC), alpha subunit family protein 1Chr19:38371477–38374357 (-)5.689e-11
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 1Chr19:38410642–38423531 (+)5.689e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.254e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.622e-14