Overview Annotation GWAS Evidence Associated genes

P30280

Metabolite ID
P30280
Deionized mass
336.1548 Da
Average m/z
337.1620
Average RT
15.9931
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.393e-12
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)2.89e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.393e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)8.403e-12
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)1.013e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.027e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.027e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.027e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.89e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.89e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.89e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.89e-13
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)8.271e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.575e-14
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)2.919e-11
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)8.076e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.632e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.727e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.727e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.239e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.239e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)9.566e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)3.197e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)8.971e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)9.255e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.663e-11
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)5.146e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)7.342e-12