Overview Annotation GWAS Evidence Associated genes

P29858

Metabolite ID
P29858
Deionized mass
424.1644 Da
Average m/z
425.1719
Average RT
15.8898
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G153200 hypothetical protein AT1G31730:AT1G31730:Adaptin family protein 1Chr01:49031976–49040525 (+)9.637e-11
Glyma.01G153300 hypothetical protein AT5G45340:CYP707A3:cytochrome P450, family 707, subfamily A, polypeptide 3__AT4G19230:CYP707A1:cytochrome P450, family … 1Chr01:49049375–49052359 (-)3.97e-12
Glyma.02G121500 hypothetical protein NA 1Chr02:12065640–12082937 (+)1.819e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)2.527e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.797e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.073e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)5.505e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)8.087e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)3.093e-13
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)2.131e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)9.223e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.127e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.127e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)3.127e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)3.127e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.459e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.564e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.459e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.459e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.166e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.166e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)6.826e-13
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)2.151e-11
Glyma.19G188800 hypothetical protein AT1G03910:AT1G03910:cactus-binding carboxy-terminal, cactin 1Chr19:44684130–44690198 (+)7.352e-11