Overview Annotation GWAS Evidence Associated genes

P29854

Metabolite ID
P29854
Deionized mass
238.1913 Da
Average m/z
239.1982
Average RT
15.8884
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)4.465e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)2.345e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)6.991e-11
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)7.262e-11
Glyma.09G053800 hypothetical protein NA 1Chr09:4737413–4755632 (-)2.642e-11
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)7.262e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.377e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.817e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.351e-12
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)9.206e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)2.105e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)2.105e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)3.34e-11