Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P29651

Metabolite ID
P29651
Deionized mass
611.3514 Da
Average m/z
612.3581
Average RT
15.8371
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
97
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

97 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)1.34e-16
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)4.878e-18
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)7.336e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.78e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.278e-11
Glyma.14G176900 SGF14K 14-3-3 protein SGF14k AT1G78300:GRF2:ral regulatory factor 2 2Chr14:43637893–43642553 (+)7.05e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)2.848e-11
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)1.953e-11
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 2Chr16:30434508–30475458 (-)7.262e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)2.759e-15
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)4.878e-18
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.338e-15
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)6.92e-14
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.484e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.484e-11
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)3.071e-12
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)6.031e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.554e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.526e-12
Glyma.03G027900 hypothetical protein AT2G45270:GCP1:glycoprotease 1 1Chr03:3048805–3061575 (-)5.146e-11
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)2.486e-11
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)1.545e-11
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)1.469e-11
Glyma.03G035800 hypothetical protein NA 1Chr03:4317466–4321009 (+)5.066e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)1.03e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)4.36e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.426e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.23e-13
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)8.76e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)3.163e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)5.409e-11
Glyma.06G317900 hypothetical protein AT5G51400:AT5G51400:PLAC8 family protein 1Chr06:50645095–50649256 (+)3.235e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)4.381e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)3.505e-11
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)5.523e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)1.952e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)7.188e-12
Glyma.08G338200 hypothetical protein NA 1Chr08:45509289–45511145 (+)4.596e-11
Glyma.08G338600 hypothetical protein NA 1Chr08:45522321–45523727 (-)4.596e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)4.596e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.554e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.821e-13
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)1.137e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)8.539e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.88e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)1.252e-13
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)1.858e-11
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)1.858e-11
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)1.858e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)1.135e-14
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)9.081e-14
Glyma.11G163300 WRKY19 WRKY transcription factor 19 NA 1Chr11:15312631–15316628 (+)8.712e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)3.004e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.963e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.963e-11
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)8.258e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)4.094e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.257e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.278e-11
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)8.534e-11
Glyma.15G024500 hypothetical protein AT3G13810:IDD11:indeterminate(ID)-domain 11 1Chr15:1970818–1978651 (-)4.392e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)4.779e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.132e-16
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.308e-16
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.132e-16
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.132e-16
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.402e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.051e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.848e-11
Glyma.16G134500 hypothetical protein NA 1Chr16:29128092–29130458 (-)5.64e-12
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)5.117e-13
Glyma.16G137000 hypothetical protein NA 1Chr16:29418205–29421765 (-)1.246e-11
Glyma.16G137100 hypothetical protein NA 1Chr16:29421091–29421534 (+)1.246e-11
Glyma.16G138400 hypothetical protein NA 1Chr16:29560913–29562163 (+)5.222e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)3.759e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.486e-11
Glyma.16G141300 hypothetical protein AT4G36710:HAM4:GRAS family transcription factor 1Chr16:29937044–29939337 (+)9.817e-12
Glyma.16G141600 hypothetical protein AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein 1Chr16:29970884–29978773 (-)9.817e-12
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 1Chr16:30388030–30390647 (-)9.513e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)2.186e-15
Glyma.16G144300 hypothetical protein NA 1Chr16:30443185–30446450 (+)1.266e-11
Glyma.16G144600 hypothetical protein NA 1Chr16:30501031–30506501 (+)4.362e-12
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)1.208e-11
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)2.109e-14
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 1Chr16:30604586–30608656 (+)1.24e-12
Glyma.16G145400 hypothetical protein AT3G12090:TET6:tetraspanin6 1Chr16:30624348–30627475 (+)3.531e-11
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 1Chr16:30630177–30636253 (+)5.433e-13
Glyma.16G145900 hypothetical protein NA 1Chr16:30681265–30689398 (-)5.59e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.338e-15
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)5.027e-16
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)1.642e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.6e-12
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)3.644e-11
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 1Chr19:860974–865476 (+)6.218e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)4.005e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.173e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.173e-11